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The map label for this gene is araA [H]

Identifier: 170024236

GI number: 170024236

Start: 2225377

End: 2226879

Strand: Direct

Name: araA [H]

Synonym: YPK_2001

Alternate gene names: 170024236

Gene position: 2225377-2226879 (Clockwise)

Preceding gene: 170024235

Following gene: 170024240

Centisome position: 47.46

GC content: 49.7

Gene sequence:

>1503_bases
ATGGACGTATTCAAGCAATCAGAAGTGTGGTTTGTCATTGGTAGCCAGAATCTGTATGGCCCTAAAACCCTGCAACAAGT
TATGGATAATGCACATCAGGTGGTCAATAGCCTGAACAGCGAAGCGGGTTTACCCGTAAAACTGGTATTAAAACCGTTGG
TTACAACACCGGATGAAATCACCGCATTATGTCGTGAAGCTAACTACGACACGGCCTGTATCGGTATCATGACCTGGCTG
CACACCTTCTCTCCGGCCAAAATGTGGATTGGCGGCCTGAGCATTCTGAATAAACCGCTGTTACAGTTCCATACCCAGTT
TAATGCCCAAATCCCGTGGGAAACGATGGATATGGACTTTATGAACCTAAACCAGACCGCACACGGTGGCCGTGAATTTG
GTTTCATTGGTGCCCGCATGCGCCAGCAACACAGTGTGATAACCGGTCACTGGCAGGATAAAGAAGCCCACCAGCGCATT
GGTCAGTGGATGCGCGTCGCCGCCGCAAAACAAGAAAGTCAACAACTGAAAGTGGCGCGCTTTGGCGATAACATGCGTGA
AGTCGCCGTAACTGAAGGGGATAAAGTCGCTGCCCAGATCCAATTTGGCTATTCCGTTAATGCTTATGGCATTGGGGATT
TAGTCGCCGTGGTCGATGCCGTCAGTAAAGGTGATATCGATACGCTGGTTGAAGAATATGAGGCCACCTATCGCTTTAGC
GATGCGGTGAAACTCAATGGTGATAAGCGCGAAAACTTACTGGATGCAGCACGTATTGAGCTAGGTATGAAGCGTTTTCT
GGAGCAAGGTGGTTTTAAAGCCTTCACCACTAACTTTGAAAATCTTTATGGTTTGAAGCAGTTACCTGGCCTGGCAGTCC
AGCGACTCATGCAACAGGGTTACGGTTTTGGTGGCGAAGGCGACTGGAAAACCGCCGCATTACTGCGCATCTTAAAAGTG
ATGGGAACCGGCCTGAAAGGCGGCACTTCCTTTATGGAGGATTACACTTATAACTTCCAGCCAGGTAATGACTTAGTTGT
TGGCTCACATATGCTGGAAGTCTGCCCGTCGATCGCCAAAGAAGAGAAGCCCCTGCTGGATGTGCAACACCTTGGCATTG
GAGGGAAAGCTGACCCTGCCCGTTTGATTTTCTCTACCCCCGCAGGCCCGGCGCTGAATGCCAGTTTGATCGATATGGGG
AACCGTTTCCGCTTGCTGGTTAATGTGGTTGATACCGTTGAACAACCTCATCCATTGCCAAAATTACCGGTTGCCCGGGC
TATCTGGCAAGCACAACCTTCACTGGCAACGGCTGCTGAAGCTTGGATCATCGCCGGTGGCGCACACCATACGGTATTCT
CACAAGCGGTGGGTGTCGATGAACTGCGTTTATATGCCGAAATGCACGGTATTGAATTCTTGTTGATCGACAATGACACG
ACGTTACCGGCGTTCAAAAACGAAATCCGTTGGAACGAGGTGTACTATCAGCTCAATCGCTAA

Upstream 100 bases:

>100_bases
CCAAGGCAATTCACTGATATTGACAAGCAGTCTACTTTAACGACATTCACGATAACTGAATGTTTTATATCGAGTAATCG
TTTATTAAATGGAGTGATAG

Downstream 100 bases:

>100_bases
TGTTGTTGGGTATGATTTTTAGTATTGGAAAAATCAGTATTATAAAATTCGCTATGATAGCGACACCCTCAGAGGCCTGT
TGGCTCCTGAGGGTGATGAC

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MDVFKQSEVWFVIGSQNLYGPKTLQQVMDNAHQVVNSLNSEAGLPVKLVLKPLVTTPDEITALCREANYDTACIGIMTWL
HTFSPAKMWIGGLSILNKPLLQFHTQFNAQIPWETMDMDFMNLNQTAHGGREFGFIGARMRQQHSVITGHWQDKEAHQRI
GQWMRVAAAKQESQQLKVARFGDNMREVAVTEGDKVAAQIQFGYSVNAYGIGDLVAVVDAVSKGDIDTLVEEYEATYRFS
DAVKLNGDKRENLLDAARIELGMKRFLEQGGFKAFTTNFENLYGLKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRILKV
MGTGLKGGTSFMEDYTYNFQPGNDLVVGSHMLEVCPSIAKEEKPLLDVQHLGIGGKADPARLIFSTPAGPALNASLIDMG
NRFRLLVNVVDTVEQPHPLPKLPVARAIWQAQPSLATAAEAWIIAGGAHHTVFSQAVGVDELRLYAEMHGIEFLLIDNDT
TLPAFKNEIRWNEVYYQLNR

Sequences:

>Translated_500_residues
MDVFKQSEVWFVIGSQNLYGPKTLQQVMDNAHQVVNSLNSEAGLPVKLVLKPLVTTPDEITALCREANYDTACIGIMTWL
HTFSPAKMWIGGLSILNKPLLQFHTQFNAQIPWETMDMDFMNLNQTAHGGREFGFIGARMRQQHSVITGHWQDKEAHQRI
GQWMRVAAAKQESQQLKVARFGDNMREVAVTEGDKVAAQIQFGYSVNAYGIGDLVAVVDAVSKGDIDTLVEEYEATYRFS
DAVKLNGDKRENLLDAARIELGMKRFLEQGGFKAFTTNFENLYGLKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRILKV
MGTGLKGGTSFMEDYTYNFQPGNDLVVGSHMLEVCPSIAKEEKPLLDVQHLGIGGKADPARLIFSTPAGPALNASLIDMG
NRFRLLVNVVDTVEQPHPLPKLPVARAIWQAQPSLATAAEAWIIAGGAHHTVFSQAVGVDELRLYAEMHGIEFLLIDNDT
TLPAFKNEIRWNEVYYQLNR
>Mature_500_residues
MDVFKQSEVWFVIGSQNLYGPKTLQQVMDNAHQVVNSLNSEAGLPVKLVLKPLVTTPDEITALCREANYDTACIGIMTWL
HTFSPAKMWIGGLSILNKPLLQFHTQFNAQIPWETMDMDFMNLNQTAHGGREFGFIGARMRQQHSVITGHWQDKEAHQRI
GQWMRVAAAKQESQQLKVARFGDNMREVAVTEGDKVAAQIQFGYSVNAYGIGDLVAVVDAVSKGDIDTLVEEYEATYRFS
DAVKLNGDKRENLLDAARIELGMKRFLEQGGFKAFTTNFENLYGLKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRILKV
MGTGLKGGTSFMEDYTYNFQPGNDLVVGSHMLEVCPSIAKEEKPLLDVQHLGIGGKADPARLIFSTPAGPALNASLIDMG
NRFRLLVNVVDTVEQPHPLPKLPVARAIWQAQPSLATAAEAWIIAGGAHHTVFSQAVGVDELRLYAEMHGIEFLLIDNDT
TLPAFKNEIRWNEVYYQLNR

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose [H]

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1786248, Length=500, Percent_Identity=73.6, Blast_Score=808, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- ProDom:   PD018364 [H]

Pfam domain/function: PF02610 Arabinose_Isome [H]

EC number: =5.3.1.4 [H]

Molecular weight: Translated: 55586; Mature: 55586

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVFKQSEVWFVIGSQNLYGPKTLQQVMDNAHQVVNSLNSEAGLPVKLVLKPLVTTPDEI
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH
TALCREANYDTACIGIMTWLHTFSPAKMWIGGLSILNKPLLQFHTQFNAQIPWETMDMDF
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
MNLNQTAHGGREFGFIGARMRQQHSVITGHWQDKEAHQRIGQWMRVAAAKQESQQLKVAR
HCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGDNMREVAVTEGDKVAAQIQFGYSVNAYGIGDLVAVVDAVSKGDIDTLVEEYEATYRFS
HCCCCCEEEECCCCEEEEEEEECCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEEC
DAVKLNGDKRENLLDAARIELGMKRFLEQGGFKAFTTNFENLYGLKQLPGLAVQRLMQQG
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCHHHCCCHHHHHHHHHC
YGFGGEGDWKTAALLRILKVMGTGLKGGTSFMEDYTYNFQPGNDLVVGSHMLEVCPSIAK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEECHHHHHHCHHHHH
EEKPLLDVQHLGIGGKADPARLIFSTPAGPALNASLIDMGNRFRLLVNVVDTVEQPHPLP
CCCCCEEHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCC
KLPVARAIWQAQPSLATAAEAWIIAGGAHHTVFSQAVGVDELRLYAEMHGIEFLLIDNDT
CCHHHHHHHHCCCCHHHHHHHEEEECCCHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCC
TLPAFKNEIRWNEVYYQLNR
CCCHHHHHCCEEEEEEEECC
>Mature Secondary Structure
MDVFKQSEVWFVIGSQNLYGPKTLQQVMDNAHQVVNSLNSEAGLPVKLVLKPLVTTPDEI
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH
TALCREANYDTACIGIMTWLHTFSPAKMWIGGLSILNKPLLQFHTQFNAQIPWETMDMDF
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
MNLNQTAHGGREFGFIGARMRQQHSVITGHWQDKEAHQRIGQWMRVAAAKQESQQLKVAR
HCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGDNMREVAVTEGDKVAAQIQFGYSVNAYGIGDLVAVVDAVSKGDIDTLVEEYEATYRFS
HCCCCCEEEECCCCEEEEEEEECCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEEC
DAVKLNGDKRENLLDAARIELGMKRFLEQGGFKAFTTNFENLYGLKQLPGLAVQRLMQQG
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCHHHCCCHHHHHHHHHC
YGFGGEGDWKTAALLRILKVMGTGLKGGTSFMEDYTYNFQPGNDLVVGSHMLEVCPSIAK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEECHHHHHHCHHHHH
EEKPLLDVQHLGIGGKADPARLIFSTPAGPALNASLIDMGNRFRLLVNVVDTVEQPHPLP
CCCCCEEHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCC
KLPVARAIWQAQPSLATAAEAWIIAGGAHHTVFSQAVGVDELRLYAEMHGIEFLLIDNDT
CCHHHHHHHHCCCCHHHHHHHEEEECCCHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCC
TLPAFKNEIRWNEVYYQLNR
CCCHHHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA