| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024184
Identifier: 170024184
GI number: 170024184
Start: 2161677
End: 2164010
Strand: Direct
Name: 170024184
Synonym: YPK_1947
Alternate gene names: NA
Gene position: 2161677-2164010 (Clockwise)
Preceding gene: 170024183
Following gene: 170024185
Centisome position: 46.1
GC content: 46.96
Gene sequence:
>2334_bases ATGACAGATATCCCAAGAGAAGCATGGGTTGCACTGAGTTTTGCTATTTTATGCCTGTTTTTTGTTTGGAAAAATATCCG TTGGGCTAAGATTGGTTCTGGACCGTCCATCAATTCAGACGTACCGAAAGCCTCAGCGATACCCGATCTGGGCGGTTATC AGCTAGACTCTCTGGCCCTTCATCCTGAACTCGTCATTGATGATGAGCTTACCGATCACCTTGATCAATCTGCTAGTGCT AAACCCTCTTCTGGTGATAAACCCTCTGCGAGTACTAAACAGTCAGAAATTTCAAGAGGCTCTCTGGCCCGTGCGTCCTG GCTTCGCCCCGGCGAATTAGCCGTGGTTGCCGGGATAACCTTAGCCGATGGCATGATCTACATTGGTAATAAACATAAGA GCAATCGCACCGGAGCAGAGCCGGCCTTTATCAATCCATCAATGCAGGTCGCCGAAGAAGAGGTAGACATTTCATTGGCG CTGATCGATAACGCCCCCGATTACTCGACATGTTCCCCGGAGGCGAGAAAAGCGTATTTGCAATGGTTATCGGAAGGTCG TAAATCTCCAATTGCTCATATTAGTTATGTTTTCTTATTTTTTTATGGATTAGAGCACCGCGTACTGATTGATGCGAGTA TTGATCCAATCGCAAAACGAGAGCTGCCCATTATTGAGGCGGAAATTAACCGATTGCTGAATATTTATGGAAAAAATAAC ACTTTTAATCATTATGCTCAGAATTTATTAGTTTATATCGCCAGAGTCGATATAGAGGAGACGCTCTATTTATTGCCACC GCCATTAAGCCGAAATGCCTCAACCGAACTGCCACTTGCTTTGTTGGTTGGCTTAGGGCAATTGGCTGTGGACCAACGGC CATTACCTGCAGAGTGGGCCTGTGCGTGGGGGGTTGCGGATCCAGCCATTAACCAAAACAGATCCTTGATGCATTGTCCT GATGCCTTCTCCCAACTTTTCCAACAGCGCTATCGGGATAAATACGGCGATGGCTTTATCTTGCCCGTCAATAAAACCAA ACTACATATTTTCTACCGTCCTGCTTCCGCAGGGTTAATGGGGCAAGAGTTCATCCAGCAGATGGGTGAGTTACCCAACG TGGCAGTATGTAAAGCCAATAGAGATAAGCTGCGGTCATTAATTGAAGCATGTCAGAACGATCTCGAGGCTTATAACCGC TTTGTGAGTTTGAATCCTAAGAAAAAAGCAGCATTAGAAGGGCTGTTACTTCTCCCGATGCCGTTGTGGCCAGAGGCATT AAACGCTGAGCTGGAAAGTATTAAAAGCCGAGTGGGCTATGGCTTACTGTTGATAACATTGGATGAACTTTTTGCCCAAC TCAGCCATGCCTGCGCATCAAACCCACTAGAACGTTTATCCCGCAATGTGGTCATTGCGCTGACTCAGGCGTTGGCATCC TTGCAGGTTGGTATAGAGCCTGATGTTCGGGCAGATAATCGTACACCAACCTTGCAAGATACAGTTGCTCTGTTTCCTAT TGAGTCCGCGACGGCGGAGTCGACAACCTTTGCCGTCTACCGTATCACGATGTTAGCCGTCGAGTTGGCTTGTGCCGCAG TGATGGTTGATGGCCGAGTTGGGGAACCCGAATCGATGATTTTGACGCGGCATATTGATGCCTGGAGCTACCTTAGCCCT GGTCAACGTATGCGTCTGAAAGCCTATCTTCAACCGGGGGTCAGGAAGAATAATACGTTGTTGGCCTTGAAAAATAACCT TGAGCCGCTATCGCTTGAACATCGCCGTGCTATTGCCCGTTTCCTGGCACACCTGATTCAGGTCGAAGGGACCATTACCC CACAAGATGTGAAATTTCTTGAGCGGGTATATAAGCGTTTTGCCCTAGACAGCAAACTGGTTTATACCGATCTTGATAGC TGTGCGACCCCGATGACATTAAGTTTGCCGCCACCAGGTTCGGTAGCACTAAATAGTGTTGATCGCATTACGCTACTGAA AAATGAAAGTCAGGAATTGGTGGCGCTGTTGGAGAATTTATTTCTAACCAAAGTGGTGGCGACAGAGGATAAAGAAGAGA TTGATCCACAATCAATGGCGGCAATAATGGCTGATATGCAGGAAGGAACCGTGACGCTCCTACGATTACTGATTTCACGC AATGCATGGGAGCGTGATAAATTAACCGATATCGCGCTGGACATGGAAATCAGACTGGACGATATACTGATTGAGATTAA TCGCAAGATATTGGCTGTTTTTGACGTACCGCTGATTACTGGCGATGCGGTTATTTCAATTAATCGTGATGTCTCGGCTG CATTATTGGCCTGA
Upstream 100 bases:
>100_bases AAAATTACTATTTTAAGATAGGGGCAGATAAACCATCGTGGCGAAGAGAAAATCTACCGGTACCGGCTGGGTTATCCTAC TGATAGTCGCTTTAGGGCTG
Downstream 100 bases:
>100_bases TAAGCAGACAGTTGATTAATAAATATAGGCTCAATAAACATAGTCTTAATAAACATAGTCTTAATAAACATCGGCAGCGT AACTTGAGCTCAAACGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 777; Mature: 776
Protein sequence:
>777_residues MTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPKASAIPDLGGYQLDSLALHPELVIDDELTDHLDQSASA KPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISLA LIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAKRELPIIEAEINRLLNIYGKNN TFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEWACAWGVADPAINQNRSLMHCP DAFSQLFQQRYRDKYGDGFILPVNKTKLHIFYRPASAGLMGQEFIQQMGELPNVAVCKANRDKLRSLIEACQNDLEAYNR FVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACASNPLERLSRNVVIALTQALAS LQVGIEPDVRADNRTPTLQDTVALFPIESATAESTTFAVYRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWSYLSP GQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLDS CATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRLLISR NAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA
Sequences:
>Translated_777_residues MTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPKASAIPDLGGYQLDSLALHPELVIDDELTDHLDQSASA KPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISLA LIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAKRELPIIEAEINRLLNIYGKNN TFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEWACAWGVADPAINQNRSLMHCP DAFSQLFQQRYRDKYGDGFILPVNKTKLHIFYRPASAGLMGQEFIQQMGELPNVAVCKANRDKLRSLIEACQNDLEAYNR FVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACASNPLERLSRNVVIALTQALAS LQVGIEPDVRADNRTPTLQDTVALFPIESATAESTTFAVYRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWSYLSP GQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLDS CATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRLLISR NAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA >Mature_776_residues TDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPKASAIPDLGGYQLDSLALHPELVIDDELTDHLDQSASAK PSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISLAL IDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAKRELPIIEAEINRLLNIYGKNNT FNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEWACAWGVADPAINQNRSLMHCPD AFSQLFQQRYRDKYGDGFILPVNKTKLHIFYRPASAGLMGQEFIQQMGELPNVAVCKANRDKLRSLIEACQNDLEAYNRF VSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACASNPLERLSRNVVIALTQALASL QVGIEPDVRADNRTPTLQDTVALFPIESATAESTTFAVYRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWSYLSPG QRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLDSC ATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRLLISRN AWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86029; Mature: 85898
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPKASAIPDLGGYQLDSLAL CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE HPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGIT CCCEEECCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCEEEEEEEE LADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISLALIDNAPDYSTCSPEARKAYL ECCCEEEECCCCCCCCCCCCCCEECCCHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHH QWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAKRELPIIEAEINRLLNIYGKNN HHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCC TFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEWA CHHHHHHHHHHHHEEECHHHEEEEECCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCHHHE CAWGVADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHIFYRPASAGLM EECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCH GQEFIQQMGELPNVAVCKANRDKLRSLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPM HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECC PLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACASNPLERLSRNVVIALTQALAS CCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH LQVGIEPDVRADNRTPTLQDTVALFPIESATAESTTFAVYRITMLAVELACAAVMVDGRV HHCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCC GEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIAR CCCCCEEEEEECCCCCCCCCCHHEEHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHH FLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLDSCATPMTLSLPPPGSVALNSV HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCEEEECCCCCCHHHCCC DRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRLLISR CEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHC NAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA CCCCCCCCEEEEEEEEEEHHHHHHHHCCEEEEEEECCEECCCEEEEECCCCHHHHCC >Mature Secondary Structure TDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPKASAIPDLGGYQLDSLAL CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE HPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGIT CCCEEECCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCEEEEEEEE LADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISLALIDNAPDYSTCSPEARKAYL ECCCEEEECCCCCCCCCCCCCCEECCCHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHH QWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAKRELPIIEAEINRLLNIYGKNN HHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCC TFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEWA CHHHHHHHHHHHHEEECHHHEEEEECCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCHHHE CAWGVADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHIFYRPASAGLM EECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCH GQEFIQQMGELPNVAVCKANRDKLRSLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPM HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECC PLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACASNPLERLSRNVVIALTQALAS CCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH LQVGIEPDVRADNRTPTLQDTVALFPIESATAESTTFAVYRITMLAVELACAAVMVDGRV HHCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCC GEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIAR CCCCCEEEEEECCCCCCCCCCHHEEHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHH FLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLDSCATPMTLSLPPPGSVALNSV HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCEEEECCCCCCHHHCCC DRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRLLISR CEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHC NAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA CCCCCCCCEEEEEEEEEEHHHHHHHHCCEEEEEEECCEECCCEEEEECCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA