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The map label for this gene is ycjF [C]

Identifier: 170024138

GI number: 170024138

Start: 2105001

End: 2106062

Strand: Direct

Name: ycjF [C]

Synonym: YPK_1899

Alternate gene names: 170024138

Gene position: 2105001-2106062 (Clockwise)

Preceding gene: 170024137

Following gene: 170024141

Centisome position: 44.89

GC content: 52.54

Gene sequence:

>1062_bases
ATGAGCGAACCGTTAAAGCCACGGATTGATTTTGAGCAGCCTCTGCAATCGTTGGATGAACCGGTATTAAAATCGGCGCA
GGCTTTTGATGAACAGGCGGCGGAGAAGTTCTATCCAGCGGCCCCGGAATTGGATGCAGAAGATGAAGAGGGGCGCGTAG
AAGGGTTGGTGAATGCTGCGTTGAAACCTAAGCGTAGCCTGTGGCGTAAGATGGTCACTGCCGGGATGGTTATCTTGGGG
GCCAGTGTGATTGCCCAGTCAGTGCAATGGGTTAATCAAGCCTGGCAGCAGCAAGATTGGATCGCTTTGGGCGCCACTAC
GGCAGGGGGGCTAATTATTCTGGCAGGTGTCGGCTCGGTGGTGACGGAATGGCGGCGTTTATATCATTTACGCCAACGGG
CTGAAGAGCGTGATATTGCTCGGGCGTTATTGGTCAGCCACGGTGTTGGTCAAGGGCGTGTTTTCTGTGAGAAATTAGCC
CGTCAGGCAGGGCTGGACCAAGGGCACCCGGCATTGCAGCGCTGGCAGGCATCACTGCATGAAACGCATAATGATCGTGA
AGTGGTTGAATTGTACGCCAAACTGGTTCAACCCGCGCTGGATAATCAGGCTCGGGCAGAAATCAGCCGCTATGCTGCTG
AATCAGCGTTGATGATCGCCGTCAGCCCTCTCGCGCTAGTGGATATGGCTTTTATTGCCTGGCGTAACATTCGTCTCATT
AATCGTATCGCTGCACTGTATGGTATTGAATTAGGGTATTTCAGCCGTATCCGTCTGTTCCGTCTGGTATTGCTGAATAT
TGCCTTTGCCGGCGCCTCTGAGTTGGTACGGGAGGTGGGCATGGATTGGCTATCACAAGATTTGGCTGCTCGTTTGTCAG
CGCGTGCGGCTCAAGGAATTGGCGCTGGGTTATTGACCGCGCGCTTGGGGATCAAAGCCATGGAGCTATGCCGCCCGTTA
CCGTGGTTAGAGGGTGATAAACCTAAACTGGGTGATTTCCGCCGCCAGTTGATGAATCAACTGAAAAATACGTTACCGAA
AAAAGATAAAACAGCACATTAA

Upstream 100 bases:

>100_bases
ATTTTGACCAGTTCCGTCCGCAAGCGGTTCATATTGACAGCCCATTACCTCATATCCGGTTAGATGCGGTGATGGAGTTT
TTATTGGGAGATAAATTGCG

Downstream 100 bases:

>100_bases
TAATAAAGGCTATTTTAACCGTGGATCAAAGACAAAAGAGAGCGGTTTGACGCTGGCCAAACACGCTGGAAAATCTTTGT
GATGAGGATTGACCAGTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSEPLKPRIDFEQPLQSLDEPVLKSAQAFDEQAAEKFYPAAPELDAEDEEGRVEGLVNAALKPKRSLWRKMVTAGMVILG
ASVIAQSVQWVNQAWQQQDWIALGATTAGGLIILAGVGSVVTEWRRLYHLRQRAEERDIARALLVSHGVGQGRVFCEKLA
RQAGLDQGHPALQRWQASLHETHNDREVVELYAKLVQPALDNQARAEISRYAAESALMIAVSPLALVDMAFIAWRNIRLI
NRIAALYGIELGYFSRIRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQGIGAGLLTARLGIKAMELCRPL
PWLEGDKPKLGDFRRQLMNQLKNTLPKKDKTAH

Sequences:

>Translated_353_residues
MSEPLKPRIDFEQPLQSLDEPVLKSAQAFDEQAAEKFYPAAPELDAEDEEGRVEGLVNAALKPKRSLWRKMVTAGMVILG
ASVIAQSVQWVNQAWQQQDWIALGATTAGGLIILAGVGSVVTEWRRLYHLRQRAEERDIARALLVSHGVGQGRVFCEKLA
RQAGLDQGHPALQRWQASLHETHNDREVVELYAKLVQPALDNQARAEISRYAAESALMIAVSPLALVDMAFIAWRNIRLI
NRIAALYGIELGYFSRIRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQGIGAGLLTARLGIKAMELCRPL
PWLEGDKPKLGDFRRQLMNQLKNTLPKKDKTAH
>Mature_352_residues
SEPLKPRIDFEQPLQSLDEPVLKSAQAFDEQAAEKFYPAAPELDAEDEEGRVEGLVNAALKPKRSLWRKMVTAGMVILGA
SVIAQSVQWVNQAWQQQDWIALGATTAGGLIILAGVGSVVTEWRRLYHLRQRAEERDIARALLVSHGVGQGRVFCEKLAR
QAGLDQGHPALQRWQASLHETHNDREVVELYAKLVQPALDNQARAEISRYAAESALMIAVSPLALVDMAFIAWRNIRLIN
RIAALYGIELGYFSRIRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQGIGAGLLTARLGIKAMELCRPLP
WLEGDKPKLGDFRRQLMNQLKNTLPKKDKTAH

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=347, Percent_Identity=74.3515850144092, Blast_Score=507, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 39265; Mature: 39134

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPLKPRIDFEQPLQSLDEPVLKSAQAFDEQAAEKFYPAAPELDAEDEEGRVEGLVNAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LKPKRSLWRKMVTAGMVILGASVIAQSVQWVNQAWQQQDWIALGATTAGGLIILAGVGSV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHHHHH
VTEWRRLYHLRQRAEERDIARALLVSHGVGQGRVFCEKLARQAGLDQGHPALQRWQASLH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ETHNDREVVELYAKLVQPALDNQARAEISRYAAESALMIAVSPLALVDMAFIAWRNIRLI
HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRIAALYGIELGYFSRIRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAGLLTARLGIKAMELCRPLPWLEGDKPKLGDFRRQLMNQLKNTLPKKDKTAH
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SEPLKPRIDFEQPLQSLDEPVLKSAQAFDEQAAEKFYPAAPELDAEDEEGRVEGLVNAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LKPKRSLWRKMVTAGMVILGASVIAQSVQWVNQAWQQQDWIALGATTAGGLIILAGVGSV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHHHHH
VTEWRRLYHLRQRAEERDIARALLVSHGVGQGRVFCEKLARQAGLDQGHPALQRWQASLH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ETHNDREVVELYAKLVQPALDNQARAEISRYAAESALMIAVSPLALVDMAFIAWRNIRLI
HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRIAALYGIELGYFSRIRLFRLVLLNIAFAGASELVREVGMDWLSQDLAARLSARAAQGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAGLLTARLGIKAMELCRPLPWLEGDKPKLGDFRRQLMNQLKNTLPKKDKTAH
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA