Click here to switch to the map view.

The map label for this gene is 170023889

Identifier: 170023889

GI number: 170023889

Start: 1831229

End: 1832233

Strand: Direct

Name: 170023889

Synonym: YPK_1648

Alternate gene names: NA

Gene position: 1831229-1832233 (Clockwise)

Preceding gene: 170023888

Following gene: 170023890

Centisome position: 39.05

GC content: 47.96

Gene sequence:

>1005_bases
ATGGCTAAAGCAACGATTAAAACCGCTTCTGTACTGGCATTTGAACGTAAGTTATCCAATTCCGACGCCATGATGTATGC
CGGGAACTGGGGGCAAACCGACAATTGGCAGCCTATCATCATTAAAGAAAAAGCGGTGCGGGGCACCATCTCCAACCGGT
TGAAAAATGCCCTGGCATCTGATCCGGTAAAACTGGATGCAGAGATCCAAAAAGCAAACTTACAACGTGTAGATGTGGCC
GCACTGCCGTTTGATACTGACACCCTGAAAATGAGTTTTACACTGCGGGTGCTGGGCAACCTCGCTACGCCATCAGTGTG
TAATGATCAAGAATATCAGGCTGAACTGGCCAGTGTTATTAATGGCTATATCAGTGAGCAGAGTTTTAGTGTGCTGGCGG
CGCGCTATGCCGAGAATCTGGCTAATGGCCGTTTCTTGTGGCGCAACCGGGTTGGGGCTGAAGATATTAAAGTGTGTATC
ACCAGCCAAACGAAGAGTTATCAATTTGATAGCAATGAATTTAGCTTGCGTCAATTTAGCCAACCCAGCAAGGAACTGAC
TGCGCTGGCACAAGAAATAGAACAAGGTTTAGCGGGCAACGGTTTTGCCTTTTTCACCGTTGATGCTTTTGTTCGTTTAG
GTAACGGGCAGGAAGTGTTCCCGTCTCAGGAGTTGGTGCTGGACAGCAACAGTAAGAAAAGCAAAGTGTTATATCAGATT
GATGGTATTGCGGCCCTGCATTCACAGAAAGTGGGTAATGCGTTACGTACCATTGATGATTGGTATCCAGATGCCACTGA
GTTGGCTTTGGGGCCGATTGCCGTTGAACCCTATGGCTCGGTGACCAGCCGGGGTAAAGCCTATCGGCAGCCAAAACAAA
AAATGGATTTCTACACCTTATTGGACAACTGGGTGACAAAAGGCACGGTACCGGCGGTCGAACAGCAACATTATGTGATG
GCAACCTTGATCCGTGGTGGTGTCTTTGGTGAGAAAGGCGAATAA

Upstream 100 bases:

>100_bases
ATCACCAGGAAGGCGATAACTACCTCTGTCGCTGTGCACTCCCGGCATCGGTTGATACCTATCTATTAAATGATGAAGAA
TAATTTTAAAGGATCTAAAA

Downstream 100 bases:

>100_bases
AGGAGGGGGCATGGATCATTATCTTGATATACGTGTGCTTCCTGATCCTGAATTTAGCGCTCAGACGTTATTGGAAGCCT
TGTTTGCTAAATTACACCGC

Product: CRISPR-associated Csy3 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csy3 Family Protein; Csy3 Family CRISPR-Associated Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Family Protein; Crispr-Associated Protein Csy3 Family; Crispr-Associated Protein; CRISPR-Associated Cas5e Family Protein

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MAKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALASDPVKLDAEIQKANLQRVDVA
ALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCI
TSQTKSYQFDSNEFSLRQFSQPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQI
DGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTLLDNWVTKGTVPAVEQQHYVM
ATLIRGGVFGEKGE

Sequences:

>Translated_334_residues
MAKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALASDPVKLDAEIQKANLQRVDVA
ALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCI
TSQTKSYQFDSNEFSLRQFSQPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQI
DGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTLLDNWVTKGTVPAVEQQHYVM
ATLIRGGVFGEKGE
>Mature_333_residues
AKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALASDPVKLDAEIQKANLQRVDVAA
LPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCIT
SQTKSYQFDSNEFSLRQFSQPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQID
GIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTLLDNWVTKGTVPAVEQQHYVMA
TLIRGGVFGEKGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36930; Mature: 36799

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALAS
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHC
DPVKLDAEIQKANLQRVDVAALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVI
CCEEECCHHHHCCCCEEEEEECCCCCCCEEEEEEEEEHHCCCCCCCCCCHHHHHHHHHHH
NGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCITSQTKSYQFDSNEFSLRQFS
HHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCHHHHHC
QPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQI
CCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHEECCCCCCCCCCEEEECCCCCCCEEEEEE
DGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHEECCEEECCCCCHHHCCHHHHCHHHHHHHHHH
LDNWVTKGTVPAVEQQHYVMATLIRGGVFGEKGE
HHHHHCCCCCCCHHCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALAS
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHC
DPVKLDAEIQKANLQRVDVAALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVI
CCEEECCHHHHCCCCEEEEEECCCCCCCEEEEEEEEEHHCCCCCCCCCCHHHHHHHHHHH
NGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCITSQTKSYQFDSNEFSLRQFS
HHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCHHHHHC
QPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQI
CCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHEECCCCCCCCCCEEEECCCCCCCEEEEEE
DGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHEECCEEECCCCCHHHCCHHHHCHHHHHHHHHH
LDNWVTKGTVPAVEQQHYVMATLIRGGVFGEKGE
HHHHHCCCCCCCHHCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA