| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023557
Identifier: 170023557
GI number: 170023557
Start: 1439041
End: 1439775
Strand: Direct
Name: 170023557
Synonym: YPK_1311
Alternate gene names: NA
Gene position: 1439041-1439775 (Clockwise)
Preceding gene: 170023552
Following gene: 170023558
Centisome position: 30.69
GC content: 34.01
Gene sequence:
>735_bases ATGTATATTAATTGTCAGACCAGATATCTGTTTTCATGTTTGACGTTTTTTTCATTTTCATTATTTGCCAATATTAATAT GGATAATACTTGTTTTTATTTAAATGATAACTACCTTGAAAAAGAGGAGAGTGATAAGGTTTGTTTGTCGTATTATACAG AAGATGATTGGCTAGGCAGTAAATGGAATAAAAATATTGCATCTATTAAGGTTCCTTTAAATATGCGAGTCGATATTTTT AGTGGTTATTCTTTCACGGGGGAATCTATGTCACTCTATCAAAATACTAACTCTGCTGATTTAGACAAGTATGGCTTTAA AAATAACATAAGTTCTTACCGCGTATTACCAAAAAGTTTATACCCCGATAATAAAAGAGTTGTGTTTGGCTATAACTCGG AGATTTTTTCTGAAAGATATATTGGCTATAATTATTATTCTACCCAGGGCCATAACATTCTGTTGAAAAAACACCATCAA CATATTGATGCTAATGGGCAAAGCTCTTCTATATTTTATAGTCATGCGGGGCAGATAATGACTGCCTTCGTTGGGCAGGG ATTTGATCGTAATCTCTACTGTTTATCCTCAACGAATAGGAGAAGTAATAGCCTGAACCTTGATGTGGCATTCACCTATT GTGATTTTAATAATTCGGGGCAAAATTGGTTTCCCAGAAAAATAGCAGACAAAGTGTACTCATTAATCAGGGAGGCGGTG CGGCATTATCTTTAG
Upstream 100 bases:
>100_bases ATTTTTCATTTGTATAATATACCCTTTATCATTTTATGCTTACCTGTAACTCAAATTGTTTAGAGGGAGATATTTTAATT AATAAAATAACGGAGGGGTT
Downstream 100 bases:
>100_bases ATGATGTCGGTTTCTATGTTGCTTTACATCAAAATAATGAGGGTACACTGGCAATCAATGAAAACACACTATGGTTTGAT GATGATAAAATTGAAGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MYINCQTRYLFSCLTFFSFSLFANINMDNTCFYLNDNYLEKEESDKVCLSYYTEDDWLGSKWNKNIASIKVPLNMRVDIF SGYSFTGESMSLYQNTNSADLDKYGFKNNISSYRVLPKSLYPDNKRVVFGYNSEIFSERYIGYNYYSTQGHNILLKKHHQ HIDANGQSSSIFYSHAGQIMTAFVGQGFDRNLYCLSSTNRRSNSLNLDVAFTYCDFNNSGQNWFPRKIADKVYSLIREAV RHYL
Sequences:
>Translated_244_residues MYINCQTRYLFSCLTFFSFSLFANINMDNTCFYLNDNYLEKEESDKVCLSYYTEDDWLGSKWNKNIASIKVPLNMRVDIF SGYSFTGESMSLYQNTNSADLDKYGFKNNISSYRVLPKSLYPDNKRVVFGYNSEIFSERYIGYNYYSTQGHNILLKKHHQ HIDANGQSSSIFYSHAGQIMTAFVGQGFDRNLYCLSSTNRRSNSLNLDVAFTYCDFNNSGQNWFPRKIADKVYSLIREAV RHYL >Mature_244_residues MYINCQTRYLFSCLTFFSFSLFANINMDNTCFYLNDNYLEKEESDKVCLSYYTEDDWLGSKWNKNIASIKVPLNMRVDIF SGYSFTGESMSLYQNTNSADLDKYGFKNNISSYRVLPKSLYPDNKRVVFGYNSEIFSERYIGYNYYSTQGHNILLKKHHQ HIDANGQSSSIFYSHAGQIMTAFVGQGFDRNLYCLSSTNRRSNSLNLDVAFTYCDFNNSGQNWFPRKIADKVYSLIREAV RHYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28510; Mature: 28510
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYINCQTRYLFSCLTFFSFSLFANINMDNTCFYLNDNYLEKEESDKVCLSYYTEDDWLGS CEEECHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCC KWNKNIASIKVPLNMRVDIFSGYSFTGESMSLYQNTNSADLDKYGFKNNISSYRVLPKSL CCCCCEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCCCHHCCCCCCCCCEEECHHHC YPDNKRVVFGYNSEIFSERYIGYNYYSTQGHNILLKKHHQHIDANGQSSSIFYSHAGQIM CCCCCEEEEECCCHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHH TAFVGQGFDRNLYCLSSTNRRSNSLNLDVAFTYCDFNNSGQNWFPRKIADKVYSLIREAV HHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH RHYL HHCC >Mature Secondary Structure MYINCQTRYLFSCLTFFSFSLFANINMDNTCFYLNDNYLEKEESDKVCLSYYTEDDWLGS CEEECHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCC KWNKNIASIKVPLNMRVDIFSGYSFTGESMSLYQNTNSADLDKYGFKNNISSYRVLPKSL CCCCCEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCCCHHCCCCCCCCCEEECHHHC YPDNKRVVFGYNSEIFSERYIGYNYYSTQGHNILLKKHHQHIDANGQSSSIFYSHAGQIM CCCCCEEEEECCCHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHH TAFVGQGFDRNLYCLSSTNRRSNSLNLDVAFTYCDFNNSGQNWFPRKIADKVYSLIREAV HHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH RHYL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA