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The map label for this gene is 170023517

Identifier: 170023517

GI number: 170023517

Start: 1399531

End: 1400205

Strand: Direct

Name: 170023517

Synonym: YPK_1271

Alternate gene names: NA

Gene position: 1399531-1400205 (Clockwise)

Preceding gene: 170023515

Following gene: 170023518

Centisome position: 29.84

GC content: 44.0

Gene sequence:

>675_bases
ATGCGCTATGTGTTACATTATAACGGTTTTATTACAGTCAGCCGGCTGATAACCTTGTTATTAACCGGGGCCGCAATGAT
TTATAGCCAATTGGCTCAAGCGCACCCCCACAGTTTTATTGATATGAAAACCACTTTCATCAATGAAAAACAGATGCTGG
TGGGAATGAAAATGGTATGGACCATGGATGAAATAACCTCTTCTGACCTGTTGTATGACGCAGAGAATGCCAAAAGTGAC
TCTGAAATCTGGAAGAAACTGGCCGCAGAAGTGATGGCTAATGTGCTGGGGCAGCACTATTTCACCGATATATACCGTGA
TGGCCAACCGGTGAAATATAAAAATTTGCCAACAGAATATCATTTATCCCGTCAGGGGCATCAGGCGGTACTCTCATTCG
TTTTACCGTTGGCTGAGCCGCAGCCATTAGTCGGTAAGCCTTTTATTATCTCAACCTATGACCCGACTTATTTTGTCGAT
ATGGCCTATGCGGATCAAAAAGCGCTCAGTCTATCGGCTGAAATGGAAAAAAACTGCAAACTCACTTTGATGACTCCCAA
CCCAGACGCATCGCTACAGGCTTATGCGCTGTCATTGGATAAAAGTGATTCACCAGGAGACGATATGGAACTTGGAAAAC
AATTTGCCCAACAAGTGACGCTTCAATGTCAGTAG

Upstream 100 bases:

>100_bases
GCATAGCAAAAGAGATTCATTCGGTTTACCGGGCCAGTAGTTTTTTACATCGACTTACAACTTACATCACAGTAATTGCA
GAATATCCAAGGGTTGAATA

Downstream 100 bases:

>100_bases
TTATTGCTCCGATTCCACGGCCCAAACAGCGACATTGGCTGATCAATTTATGGCCTCTATTGTTGTTCTTACTCATATTG
GCTAGCGCTGGGTATGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRYVLHYNGFITVSRLITLLLTGAAMIYSQLAQAHPHSFIDMKTTFINEKQMLVGMKMVWTMDEITSSDLLYDAENAKSD
SEIWKKLAAEVMANVLGQHYFTDIYRDGQPVKYKNLPTEYHLSRQGHQAVLSFVLPLAEPQPLVGKPFIISTYDPTYFVD
MAYADQKALSLSAEMEKNCKLTLMTPNPDASLQAYALSLDKSDSPGDDMELGKQFAQQVTLQCQ

Sequences:

>Translated_224_residues
MRYVLHYNGFITVSRLITLLLTGAAMIYSQLAQAHPHSFIDMKTTFINEKQMLVGMKMVWTMDEITSSDLLYDAENAKSD
SEIWKKLAAEVMANVLGQHYFTDIYRDGQPVKYKNLPTEYHLSRQGHQAVLSFVLPLAEPQPLVGKPFIISTYDPTYFVD
MAYADQKALSLSAEMEKNCKLTLMTPNPDASLQAYALSLDKSDSPGDDMELGKQFAQQVTLQCQ
>Mature_224_residues
MRYVLHYNGFITVSRLITLLLTGAAMIYSQLAQAHPHSFIDMKTTFINEKQMLVGMKMVWTMDEITSSDLLYDAENAKSD
SEIWKKLAAEVMANVLGQHYFTDIYRDGQPVKYKNLPTEYHLSRQGHQAVLSFVLPLAEPQPLVGKPFIISTYDPTYFVD
MAYADQKALSLSAEMEKNCKLTLMTPNPDASLQAYALSLDKSDSPGDDMELGKQFAQQVTLQCQ

Specific function: Unknown

COG id: COG3683

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010412
- InterPro:   IPR016537 [H]

Pfam domain/function: PF06226 DUF1007 [H]

EC number: NA

Molecular weight: Translated: 25291; Mature: 25291

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYVLHYNGFITVSRLITLLLTGAAMIYSQLAQAHPHSFIDMKTTFINEKQMLVGMKMVW
CEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCHHHHHHHHHHH
TMDEITSSDLLYDAENAKSDSEIWKKLAAEVMANVLGQHYFTDIYRDGQPVKYKNLPTEY
HHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHH
HLSRQGHQAVLSFVLPLAEPQPLVGKPFIISTYDPTYFVDMAYADQKALSLSAEMEKNCK
HHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCE
LTLMTPNPDASLQAYALSLDKSDSPGDDMELGKQFAQQVTLQCQ
EEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRYVLHYNGFITVSRLITLLLTGAAMIYSQLAQAHPHSFIDMKTTFINEKQMLVGMKMVW
CEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCHHHHHHHHHHH
TMDEITSSDLLYDAENAKSDSEIWKKLAAEVMANVLGQHYFTDIYRDGQPVKYKNLPTEY
HHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHH
HLSRQGHQAVLSFVLPLAEPQPLVGKPFIISTYDPTYFVDMAYADQKALSLSAEMEKNCK
HHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCE
LTLMTPNPDASLQAYALSLDKSDSPGDDMELGKQFAQQVTLQCQ
EEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]