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The map label for this gene is ail [H]

Identifier: 170023514

GI number: 170023514

Start: 1395821

End: 1396360

Strand: Direct

Name: ail [H]

Synonym: YPK_1268

Alternate gene names: 170023514

Gene position: 1395821-1396360 (Clockwise)

Preceding gene: 170023513

Following gene: 170023515

Centisome position: 29.77

GC content: 41.11

Gene sequence:

>540_bases
ATGAATAAGACATTACTGGTCTCTTCTTTAATTGCATGTTTATCAATTGCGTCTGTTAATGTGTATGCCGAAGGCGAAAG
CAGTATTTCTATTGGATATGCTCAAAGTCGTGTCAAGGACGATGGGTACAAGTTGGATAAAAATCCAAGAGGTTTCAACC
TGAAGTATCGTTATGAATTCAATAATGACTGGGGAGTGATAGGTTCATTTGCTCAGACTCGCCGGGGGTTCGAGGAATCT
GTTGACGGATTCAAACTTATTGATGGTGATTTTAAGTACTACTCAGTGACTGCGGGGCCTGTTTTCCGCATTAACGAGTA
TGTTAGCTTGTATGGATTATTGGGGGCAGGTCATGGAAAGGCTAAAGTTTCCTCAATATTTGGTCAATCAGAGAGTAGAA
GTAAAACATCTCTGGCATACGGTGCCGGATTACAATTTAATCCACATCCAAATTTTGTCATTGATGCTTCATATGAATAC
TCCAAACTCGATGATGTGAAAGTGGGTACTTGGATGCTTGGCGCGGGTTACCGGTTCTAA

Upstream 100 bases:

>100_bases
ATCCATATTTTCATGTGTCAGATATTTGTTAATATTTGGCTGGCCACTTTAGTCTGTGGTTACTGTATTAGGTATTGTTA
TAACAATCTGGATGGTTTTT

Downstream 100 bases:

>100_bases
CGTCCTCCTAACCATGAAAACCCACCATAATGGTGGTTTCAGATTGCTGACAAAGTCCTGGCCTTATAGCTGGGGCTTTA
AATTAATAGGGGTAGGCTAA

Product: virulence-related outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKDDGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEES
VDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKVSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEY
SKLDDVKVGTWMLGAGYRF

Sequences:

>Translated_179_residues
MNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKDDGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEES
VDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKVSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEY
SKLDDVKVGTWMLGAGYRF
>Mature_179_residues
MNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKDDGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEES
VDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKVSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEY
SKLDDVKVGTWMLGAGYRF

Specific function: Promotes the invasion of pathogenic bacteria into eukaryotic cells by an unknown mechanism [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ail/ompX/pagC/lom family [H]

Homologues:

Organism=Escherichia coli, GI1787034, Length=179, Percent_Identity=43.0167597765363, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000758
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06316 Ail_Lom [H]

EC number: NA

Molecular weight: Translated: 19802; Mature: 19802

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00694 ENT_VIR_OMP_1 ; PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKDDGYKLDKNPRGFNLKYRYEF
CCCCHHHHHHHHHHHHHEEEEEECCCCEEEEEEHHHHCCCCCEEECCCCCCCEEEEEEEE
NNDWGVIGSFAQTRRGFEESVDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGK
CCCCCEEECHHHHHCCHHHCCCCEEEECCCEEEEEEECCCEEEHHHHHEEEHEECCCCCC
AKVSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF
HHHHHHHCCCCCCCCCEEEECCCCEECCCCCEEEECCCCCCCCCCEEECEEEECCCCCC
>Mature Secondary Structure
MNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKDDGYKLDKNPRGFNLKYRYEF
CCCCHHHHHHHHHHHHHEEEEEECCCCEEEEEEHHHHCCCCCEEECCCCCCCEEEEEEEE
NNDWGVIGSFAQTRRGFEESVDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGK
CCCCCEEECHHHHHCCHHHCCCCEEEECCCEEEEEEECCCEEEHHHHHEEEHEECCCCCC
AKVSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF
HHHHHHHCCCCCCCCCEEEECCCCEECCCCCEEEECCCCCCCCCCEEECEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8698470 [H]