| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023491
Identifier: 170023491
GI number: 170023491
Start: 1369419
End: 1371200
Strand: Direct
Name: 170023491
Synonym: YPK_1245
Alternate gene names: NA
Gene position: 1369419-1371200 (Clockwise)
Preceding gene: 170023490
Following gene: 170023495
Centisome position: 29.2
GC content: 47.14
Gene sequence:
>1782_bases TTGGATAACAGATTTTTTAAAGTGCCGTTCGCGTCAAACGGTGACACGCAAACAATTCCAGACGAAACAGATAACGAGGG GTTTGTTAGTTTTAATGAGGGCTGGGGCGGGGACTACGAGCGTGACTTGAGGACAGACACCCGCGCCAAGCCGGTTGGCC GTAAAGAAATGAATTACGTATTAAATGCGATAACACGAAATATTCGGCAGTATCAAACTACGGGCTTTCCTGAGTTTATT ACAGCGGCAGATAATAACGGGGCGGCGTTCGCGTACGGTGCCGGCGTTGTTGTCATGTACAACAACGCTCTCTATCTGTC ACTTGTATCGAACAATGTAAGCGTTCCCGGATCTGATGAAAGTACATGGCAGGTGTATATTCAGCGCGAAGCAACGGAAG GGGAAACCCTCGCGGGGGTGAGTGCGATTAGTGCGATCACGCCGCGACGATTAAAATTAAAAACGGATATCATCGAAAAT AGTATTACTGATATTAGCAGTTCATTAAGCCGTGTCGGTAATCTGCAAGTTGCACAAGTCTATTTAGAGTCGTCTGGAGT TGTCACTTTAACTGTTCCGACTGACTGTGTGCAAATATTGCTCATTGGTCGCTACGTTACTGACGGCGTAGAAAGCCGGG ATCGCTGGGATAGTACTATCTATGCGAATGGAGAGCTTGTTGATACGACGTCATTCTACGGGTTTGTGACTGGCGGCAGT GGCCACGGACACCACCGGCGGGAATTTCTACCTTTTAGTAAATTAATTGATATGCAAGTACTGGCAGGAGACCCAATTAA TTTTCAATACACAAGCAATCGCAACAGTAATACAACATTCACAGTTTTCTACATTCAGGGCGTGAGTACTGAAGAGCCTG ATCAGCCATCAACTATCATCATTTCACCTTTAAATAGCGTAATAAATGCGGGGACTAGCCAACAACTGATCGCAATGGTC CTGCCATCAAGTGCCGCCGCTGAATACCCTGTTACGTGGCAAGTATCCGACCCGGCGCTGGGAACTATTGACAGCAACGG CAGGTATTCCGCAAATGTTGGAGCCAGCGGCACACAAAGCGTTATAGCTAGCGTTTCCACGGGACTGGCGTCCACAGCAA TAATAACGCAACACATTTTTCTTACTGGGATCGAGTTCGGTGATGTTCCAGCAAATTTAGTCGCTGGGAATACTTACACA GTACCGATTACTTATACCCCCGCGAATTACACAGAGGCGATACTCACATCATCATCAGACTCAACGAGTGCGACATTATC AGCACTCGGAACGCTATCAATCAGTAACGCAGGTTCGACAACGTTATCGTTGGCTGGCGCAAATTCTGGTATCACAAAGT CAATAACGATTGTTGCTGTAGATAAAGAAACGCCGGATGTGTTTCTTAAAATTGAAAATAACTTATCTGATGTGTCGAGC ATATCCGAGGCCCGAGAAAATATTGGCCTGGGCGAACTGGCAACCAAGGATTCGTTAACCGCCGGCGATGTAGGAGCTGT TCATATTGCTGATGTAGCGATAGTTGCAGAGTTGGATTTAAACAGCATGACGGGGCCGGGGGAGTACTTTCAAAACATAT CGAGCAACGCTCTACTGAGTTTAAATTATCCGATCAACGTGGCAGGGGCGCTAAAGGTTTACGGAACGGGGGTAGACGCT GTTGGGTGCCGACAAGTGTACATGCCCTATAACTCAACTTCTGAGTACAGGCGCTACGCGTACGGGGATCCGCTAGTGTT CTCCTCATGGATTGAGAAATAA
Upstream 100 bases:
>100_bases GACATATCAAAAAAGAGGGGGAAACTTTTCGCATCAAAGTATTTATATAATCAAATAATTTCAGTGTACGGCAATGAAAC TCCGGAAAAGGAAATAAAAA
Downstream 100 bases:
>100_bases AAAACCGGGCTGATTGGCCCGGACGCCTATCTTACTTGGGTGTTGCGCTCTTCCGCTTTGCATCAAAGAGGTGCCATAGT TTCATAATTAATACATAGGC
Product: Ig-like domain-containing protein
Products: NA
Alternate protein names: Ig-Like Domain-Containing Protein; Phage Tail Protein
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MDNRFFKVPFASNGDTQTIPDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYVLNAITRNIRQYQTTGFPEFI TAADNNGAAFAYGAGVVVMYNNALYLSLVSNNVSVPGSDESTWQVYIQREATEGETLAGVSAISAITPRRLKLKTDIIEN SITDISSSLSRVGNLQVAQVYLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTIIISPLNSVINAGTSQQLIAMV LPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQSVIASVSTGLASTAIITQHIFLTGIEFGDVPANLVAGNTYT VPITYTPANYTEAILTSSSDSTSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS ISEARENIGLGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLSLNYPINVAGALKVYGTGVDA VGCRQVYMPYNSTSEYRRYAYGDPLVFSSWIEK
Sequences:
>Translated_593_residues MDNRFFKVPFASNGDTQTIPDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYVLNAITRNIRQYQTTGFPEFI TAADNNGAAFAYGAGVVVMYNNALYLSLVSNNVSVPGSDESTWQVYIQREATEGETLAGVSAISAITPRRLKLKTDIIEN SITDISSSLSRVGNLQVAQVYLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTIIISPLNSVINAGTSQQLIAMV LPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQSVIASVSTGLASTAIITQHIFLTGIEFGDVPANLVAGNTYT VPITYTPANYTEAILTSSSDSTSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS ISEARENIGLGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLSLNYPINVAGALKVYGTGVDA VGCRQVYMPYNSTSEYRRYAYGDPLVFSSWIEK >Mature_593_residues MDNRFFKVPFASNGDTQTIPDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYVLNAITRNIRQYQTTGFPEFI TAADNNGAAFAYGAGVVVMYNNALYLSLVSNNVSVPGSDESTWQVYIQREATEGETLAGVSAISAITPRRLKLKTDIIEN SITDISSSLSRVGNLQVAQVYLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTIIISPLNSVINAGTSQQLIAMV LPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQSVIASVSTGLASTAIITQHIFLTGIEFGDVPANLVAGNTYT VPITYTPANYTEAILTSSSDSTSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS ISEARENIGLGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLSLNYPINVAGALKVYGTGVDA VGCRQVYMPYNSTSEYRRYAYGDPLVFSSWIEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63424; Mature: 63424
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNRFFKVPFASNGDTQTIPDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYV CCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHH LNAITRNIRQYQTTGFPEFITAADNNGAAFAYGAGVVVMYNNALYLSLVSNNVSVPGSDE HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCEEEEEECCEEEEEEEECCCCCCCCCC STWQVYIQREATEGETLAGVSAISAITPRRLKLKTDIIENSITDISSSLSRVGNLQVAQV CEEEEEEEEECCCCCEEHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEE YLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS EEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCEEEEEEECCC GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTII CCCCCHHHCCCHHHHHCEEEECCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEE ISPLNSVINAGTSQQLIAMVLPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQS EECHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCEEECCCCCCHHH VIASVSTGLASTAIITQHIFLTGIEFGDVPANLVAGNTYTVPITYTPANYTEAILTSSSD HHHHHHCCHHHHHHHHEEEEEEECCCCCCCCEEECCCEEEEEEEECCCCCCEEEEECCCC STSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS CCHHEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCCHHHHHH ISEARENIGLGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLS HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHCCCCCEEEE LNYPINVAGALKVYGTGVDAVGCRQVYMPYNSTSEYRRYAYGDPLVFSSWIEK ECCCEEEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCEEHHHHHCC >Mature Secondary Structure MDNRFFKVPFASNGDTQTIPDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYV CCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHH LNAITRNIRQYQTTGFPEFITAADNNGAAFAYGAGVVVMYNNALYLSLVSNNVSVPGSDE HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCEEEEEECCEEEEEEEECCCCCCCCCC STWQVYIQREATEGETLAGVSAISAITPRRLKLKTDIIENSITDISSSLSRVGNLQVAQV CEEEEEEEEECCCCCEEHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEE YLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS EEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCEEEEEEECCC GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTII CCCCCHHHCCCHHHHHCEEEECCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEE ISPLNSVINAGTSQQLIAMVLPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQS EECHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCEEECCCCCCHHH VIASVSTGLASTAIITQHIFLTGIEFGDVPANLVAGNTYTVPITYTPANYTEAILTSSSD HHHHHHCCHHHHHHHHEEEEEEECCCCCCCCEEECCCEEEEEEEECCCCCCEEEEECCCC STSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS CCHHEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCCHHHHHH ISEARENIGLGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLS HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHCCCCCEEEE LNYPINVAGALKVYGTGVDAVGCRQVYMPYNSTSEYRRYAYGDPLVFSSWIEK ECCCEEEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA