| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023489
Identifier: 170023489
GI number: 170023489
Start: 1367390
End: 1369201
Strand: Direct
Name: 170023489
Synonym: YPK_1243
Alternate gene names: NA
Gene position: 1367390-1369201 (Clockwise)
Preceding gene: 170023488
Following gene: 170023490
Centisome position: 29.16
GC content: 40.23
Gene sequence:
>1812_bases ATGTCAACGCAAATACCTGAAATAAATAGCAGCATGAATTTATTACGTAACATCATTTGGCAATATGACGGTAGCGAAGA AATACAAACGTTAATGCAGAAAAAGGAAGAATGGTACAACAAAGCGCATACCGAATTTTGGAATAACTGGTTCACTGATG TTTTTGATTTACGTACAGCGAATGATTTTGGCTTAAGTGTATGGGCTTTAATTCTTGGCGTTAATTTATTTATTCCTGAA TGCCCCAACGTGGTTTTAACCACTGAACAAAAACGCCTGGTATGCAGACTGCGTTATTATCAATTAATTACACGTTGCAC CATTCCCGAAGTTAACGCGATCATGATGGATATGTTCGCGACTGAGAACGGCAAAGCTTACGCGCTCGATCCTAACGATA TGTCGTCAATCATGTATGTATTCACTGAACAGCCAGCCAGCGCTGTAGCGTTGATACTGACCAAATATGACTTATTACCG CGTCCTGCAACCGTGGGCCTAAAGTTTCGTGTTATTCGCTATATTCCCTTTGGTTTCGGTCAATACTATCAAAACTTTGA ACATGCCGGGTTTTGGGATGGCGGCGAACTGATTAATTACGGATGGCGCATTAACTTATTTTTTGACAATGATAGCGGCG TACTGCACGGGCAAATAGCATCATCTGACAGTACGATAGATTTATCGAGCATTGACGTCACGCTGTACTACACAAAATCA ACGGGTGAGACATTTACACGTGAAGTCACGACGACTGATGACGGGCTATTTACGGACCTTGTGAGTCGCTCAGGGGCTTA CTCTGTCATTGCAAAGACACAGATATTTACGCCGATCTGCACAGTAGATAATGTTGAATCAAGAAGCTACGCGTTCACGT ACTTAATCAGCGGTGCTGATGTGATGCTTAAGATTTACAACCCTGAAGCGCCGTTATTTAAATTAAACGACATTGGGGAA GTAATCACGATTGATTACGGCGATGGTGTAGACAGTGATGATTATCGTGTTGATAGCCAGGGATTGGTTTATGCAACTCG CGCGTTGACTGCAGGGATTACGTATAGAATAAACGTAAAGCGTAGTAATAGCTGTGTGTTTTATCATTCATCATTGGCGT TTGAAAATAAAGTAATAGAAGTCATTAGCGTGTCTGGCAGCAGGCAGAGTATGGCTAACTCATTTACAGCTTGCACTGAG TTACAAGTAATACAGGCTGGGGCATTCGATTATTTGCCAAATGTCACTACGTTTAGTTTTGCGTTTAATGACTGCTTATC GCTGCAATTGATACCTGATAATTTATTTAAATATTGTACGCGCGTTGTTAACTTTAGTTATGTATTCTTATCTTGTTGGA GTTTGCAATATATACCCACAGGATTGTTTGACTACAACCCATTAGTGACAACATTTCAGTTTGCATTTAGATTCTGTACG TCTCTTAAAGAAATTCCGGCAGGTTTGTTTGATAACAATACGTTCGTTACATCATTTAAAATCGCGTTCGGAAATTGCTC AAAAATATTAAGTGCGCCAACTGGGTTATTCGATAATGCACCGAATGCGACAATTTTTGAAAACGTATTTGTGGATTGTT TGCTTATGACTTCTGACATCAATGATATCTTCCCGCTTGCTGAATATAACGCAATTAAAGATTTGTGGTGGGCGTTTAAC AATTGCCGGTTATTACGCGGCAGTGCGCTTACGTTTATAGATAAAGTGCCGAATGTAACAATCAAGACAAAGACATTTAC GAATGCGTCTAGTTTGTCGGATTACAATCAAATACCCGCAGCTTGGAGGTAA
Upstream 100 bases:
>100_bases CAGAAGAGAACATATCAGTTGTGATTAACGTATAACGAGTTAAAAGCAATATCATTGAATATAGAAAGCTGCTTCGGCAG TTTTTTTATGGGCGCAATAT
Downstream 100 bases:
>100_bases TAAATGGTATCGCTGGCAGTGATAAAAGAAAGGATAGATTACCAACAGACTGATGAGAATTTTATAAATTATCTCAAAAT ATTAAATATGAATGGTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related-Protein; Cellulosome Dockerin Type I; Cellulosome
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MSTQIPEINSSMNLLRNIIWQYDGSEEIQTLMQKKEEWYNKAHTEFWNNWFTDVFDLRTANDFGLSVWALILGVNLFIPE CPNVVLTTEQKRLVCRLRYYQLITRCTIPEVNAIMMDMFATENGKAYALDPNDMSSIMYVFTEQPASAVALILTKYDLLP RPATVGLKFRVIRYIPFGFGQYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSDSTIDLSSIDVTLYYTKS TGETFTREVTTTDDGLFTDLVSRSGAYSVIAKTQIFTPICTVDNVESRSYAFTYLISGADVMLKIYNPEAPLFKLNDIGE VITIDYGDGVDSDDYRVDSQGLVYATRALTAGITYRINVKRSNSCVFYHSSLAFENKVIEVISVSGSRQSMANSFTACTE LQVIQAGAFDYLPNVTTFSFAFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCWSLQYIPTGLFDYNPLVTTFQFAFRFCT SLKEIPAGLFDNNTFVTSFKIAFGNCSKILSAPTGLFDNAPNATIFENVFVDCLLMTSDINDIFPLAEYNAIKDLWWAFN NCRLLRGSALTFIDKVPNVTIKTKTFTNASSLSDYNQIPAAWR
Sequences:
>Translated_603_residues MSTQIPEINSSMNLLRNIIWQYDGSEEIQTLMQKKEEWYNKAHTEFWNNWFTDVFDLRTANDFGLSVWALILGVNLFIPE CPNVVLTTEQKRLVCRLRYYQLITRCTIPEVNAIMMDMFATENGKAYALDPNDMSSIMYVFTEQPASAVALILTKYDLLP RPATVGLKFRVIRYIPFGFGQYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSDSTIDLSSIDVTLYYTKS TGETFTREVTTTDDGLFTDLVSRSGAYSVIAKTQIFTPICTVDNVESRSYAFTYLISGADVMLKIYNPEAPLFKLNDIGE VITIDYGDGVDSDDYRVDSQGLVYATRALTAGITYRINVKRSNSCVFYHSSLAFENKVIEVISVSGSRQSMANSFTACTE LQVIQAGAFDYLPNVTTFSFAFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCWSLQYIPTGLFDYNPLVTTFQFAFRFCT SLKEIPAGLFDNNTFVTSFKIAFGNCSKILSAPTGLFDNAPNATIFENVFVDCLLMTSDINDIFPLAEYNAIKDLWWAFN NCRLLRGSALTFIDKVPNVTIKTKTFTNASSLSDYNQIPAAWR >Mature_602_residues STQIPEINSSMNLLRNIIWQYDGSEEIQTLMQKKEEWYNKAHTEFWNNWFTDVFDLRTANDFGLSVWALILGVNLFIPEC PNVVLTTEQKRLVCRLRYYQLITRCTIPEVNAIMMDMFATENGKAYALDPNDMSSIMYVFTEQPASAVALILTKYDLLPR PATVGLKFRVIRYIPFGFGQYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSDSTIDLSSIDVTLYYTKST GETFTREVTTTDDGLFTDLVSRSGAYSVIAKTQIFTPICTVDNVESRSYAFTYLISGADVMLKIYNPEAPLFKLNDIGEV ITIDYGDGVDSDDYRVDSQGLVYATRALTAGITYRINVKRSNSCVFYHSSLAFENKVIEVISVSGSRQSMANSFTACTEL QVIQAGAFDYLPNVTTFSFAFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCWSLQYIPTGLFDYNPLVTTFQFAFRFCTS LKEIPAGLFDNNTFVTSFKIAFGNCSKILSAPTGLFDNAPNATIFENVFVDCLLMTSDINDIFPLAEYNAIKDLWWAFNN CRLLRGSALTFIDKVPNVTIKTKTFTNASSLSDYNQIPAAWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68274; Mature: 68143
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQIPEINSSMNLLRNIIWQYDGSEEIQTLMQKKEEWYNKAHTEFWNNWFTDVFDLRTA CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NDFGLSVWALILGVNLFIPECPNVVLTTEQKRLVCRLRYYQLITRCTIPEVNAIMMDMFA CCCCHHHHHHHHCCCEECCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEE TENGKAYALDPNDMSSIMYVFTEQPASAVALILTKYDLLPRPATVGLKFRVIRYIPFGFG CCCCCEEEECCCCCCCEEEEEECCCHHHHEEEEHHHCCCCCCCCCCEEEEEEEEECCCHH QYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSDSTIDLSSIDVTLYYTKS HHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEEEEEEEECC TGETFTREVTTTDDGLFTDLVSRSGAYSVIAKTQIFTPICTVDNVESRSYAFTYLISGAD CCCCEEEEEECCCCCHHHHHHHCCCCEEEEEEHEEECEEECCCCCCCCCEEEEEEEECCE VMLKIYNPEAPLFKLNDIGEVITIDYGDGVDSDDYRVDSQGLVYATRALTAGITYRINVK EEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCEECCCCEEEEEEHHHCCEEEEEEEE RSNSCVFYHSSLAFENKVIEVISVSGSRQSMANSFTACTELQVIQAGAFDYLPNVTTFSF ECCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEEEEECCCHHHCCCCEEEEE AFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCWSLQYIPTGLFDYNPLVTTFQFAFRFCT ECCCCEEEEECHHHHHHHHHHHHHHHEEEEEHEEHEECCCCCCCCCHHHHHHHHHHHHHH SLKEIPAGLFDNNTFVTSFKIAFGNCSKILSAPTGLFDNAPNATIFENVFVDCLLMTSDI HHHHCCCCCCCCCEEEEEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEECCC NDIFPLAEYNAIKDLWWAFNNCRLLRGSALTFIDKVPNVTIKTKTFTNASSLSDYNQIPA CHHCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCC AWR CCC >Mature Secondary Structure STQIPEINSSMNLLRNIIWQYDGSEEIQTLMQKKEEWYNKAHTEFWNNWFTDVFDLRTA CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NDFGLSVWALILGVNLFIPECPNVVLTTEQKRLVCRLRYYQLITRCTIPEVNAIMMDMFA CCCCHHHHHHHHCCCEECCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEE TENGKAYALDPNDMSSIMYVFTEQPASAVALILTKYDLLPRPATVGLKFRVIRYIPFGFG CCCCCEEEECCCCCCCEEEEEECCCHHHHEEEEHHHCCCCCCCCCCEEEEEEEEECCCHH QYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSDSTIDLSSIDVTLYYTKS HHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEEEEEEEECC TGETFTREVTTTDDGLFTDLVSRSGAYSVIAKTQIFTPICTVDNVESRSYAFTYLISGAD CCCCEEEEEECCCCCHHHHHHHCCCCEEEEEEHEEECEEECCCCCCCCCEEEEEEEECCE VMLKIYNPEAPLFKLNDIGEVITIDYGDGVDSDDYRVDSQGLVYATRALTAGITYRINVK EEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCEECCCCEEEEEEHHHCCEEEEEEEE RSNSCVFYHSSLAFENKVIEVISVSGSRQSMANSFTACTELQVIQAGAFDYLPNVTTFSF ECCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEEEEECCCHHHCCCCEEEEE AFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCWSLQYIPTGLFDYNPLVTTFQFAFRFCT ECCCCEEEEECHHHHHHHHHHHHHHHEEEEEHEEHEECCCCCCCCCHHHHHHHHHHHHHH SLKEIPAGLFDNNTFVTSFKIAFGNCSKILSAPTGLFDNAPNATIFENVFVDCLLMTSDI HHHHCCCCCCCCCEEEEEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEECCC NDIFPLAEYNAIKDLWWAFNNCRLLRGSALTFIDKVPNVTIKTKTFTNASSLSDYNQIPA CHHCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCC AWR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA