| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023480
Identifier: 170023480
GI number: 170023480
Start: 1360918
End: 1361358
Strand: Direct
Name: 170023480
Synonym: YPK_1234
Alternate gene names: NA
Gene position: 1360918-1361358 (Clockwise)
Preceding gene: 170023479
Following gene: 170023481
Centisome position: 29.02
GC content: 47.85
Gene sequence:
>441_bases ATGGATATTTCAGGTTTTGGCACAATTGTTAATATTCGTGCTTCAAAAACGTTCCCCGCAGGTTTTAACGTTACGCAATT TGCAGATGATGCTGACCCGCTTGATTCGCCGTCTCAACAACTCGCGGACGTAGGCATGGGGCTAAACGGCGATATGGTGT CTTGGAGCGTGGCTCAAGTGCTGCAAGTCACATTAAACATCACCCCCAACAGCGACGATGATCGTAACTTAGCGATACTG GCTGAGGCGAACAGAATAGCAAAGGGTAAGCGCAGCGTTAATGATGAAATTACCATGTCGATTTCATACCCAAGCGGGGA AAGTCGGACGTTATCTGGGGGGGTTATCACGGATGCCATGATCGGTAATAGCGTGAGCAGCGCGGGCCGGTTGAAATCAA AGCCGTATATTTTTAAATTTGAGAACCAGGTGATCGCATAA
Upstream 100 bases:
>100_bases GCCGGATTGAATGGCAGTGTGTCTACACGCTGATTTATAGCAAAGATGATGCCGTTCGTCGCATCGTCGGCACCCACGCA CTGATTTAAGGACAGATAGA
Downstream 100 bases:
>100_bases TGTTAGAGCCTATTGAAAAAGAAATCCCCCTGCCCGAGGGTGGCACAAAGACCTTCATTCTGAGTAAGTTCCCGGCCATC GCCGGTCGTGAAATCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related-Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MDISGFGTIVNIRASKTFPAGFNVTQFADDADPLDSPSQQLADVGMGLNGDMVSWSVAQVLQVTLNITPNSDDDRNLAIL AEANRIAKGKRSVNDEITMSISYPSGESRTLSGGVITDAMIGNSVSSAGRLKSKPYIFKFENQVIA
Sequences:
>Translated_146_residues MDISGFGTIVNIRASKTFPAGFNVTQFADDADPLDSPSQQLADVGMGLNGDMVSWSVAQVLQVTLNITPNSDDDRNLAIL AEANRIAKGKRSVNDEITMSISYPSGESRTLSGGVITDAMIGNSVSSAGRLKSKPYIFKFENQVIA >Mature_146_residues MDISGFGTIVNIRASKTFPAGFNVTQFADDADPLDSPSQQLADVGMGLNGDMVSWSVAQVLQVTLNITPNSDDDRNLAIL AEANRIAKGKRSVNDEITMSISYPSGESRTLSGGVITDAMIGNSVSSAGRLKSKPYIFKFENQVIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15531; Mature: 15531
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISGFGTIVNIRASKTFPAGFNVTQFADDADPLDSPSQQLADVGMGLNGDMVSWSVAQV CCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHE LQVTLNITPNSDDDRNLAILAEANRIAKGKRSVNDEITMSISYPSGESRTLSGGVITDAM EEEEEEECCCCCCCCCEEEEECCCHHHCCCCCCCCEEEEEEECCCCCCEEECCCEEEHHH IGNSVSSAGRLKSKPYIFKFENQVIA HCCCCCCCCCCCCCCEEEEECCEECC >Mature Secondary Structure MDISGFGTIVNIRASKTFPAGFNVTQFADDADPLDSPSQQLADVGMGLNGDMVSWSVAQV CCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHE LQVTLNITPNSDDDRNLAILAEANRIAKGKRSVNDEITMSISYPSGESRTLSGGVITDAM EEEEEEECCCCCCCCCEEEEECCCHHHCCCCCCCCEEEEEEECCCCCCEEECCCEEEHHH IGNSVSSAGRLKSKPYIFKFENQVIA HCCCCCCCCCCCCCCEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA