| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023441
Identifier: 170023441
GI number: 170023441
Start: 1329966
End: 1331366
Strand: Direct
Name: 170023441
Synonym: YPK_1195
Alternate gene names: NA
Gene position: 1329966-1331366 (Clockwise)
Preceding gene: 170023439
Following gene: 170023446
Centisome position: 28.36
GC content: 44.61
Gene sequence:
>1401_bases ATGGTTCGCAATGTAACACAAAAGCTCGCAACCCCCAATAATGATGGTTTTTTAACCGCTCTAGCGAGGTGGGAGGCTTG CAAGCCTCCGTATACAAGCTCGCACATGAAGATCTGTGTTACTGCGGCAAAAGTAATACTCTCCCAGGTTGTTCAGCCAC GGCGTTCTAAGTACGAAAAAGAGAATTTTCTTCGTATCGATTTCAGTAAGGCGGGAAAGGTTACATTCTATGCCGAGTTC CCAAAAAAGATGGCACTCAAAGGCAAAAAGCTTGGTGAGTGGCCAGAAATGGCAATTCAGGTGGCAAGAGAGAAAGCAAA GGATTTATCTGAGGGTGGGTTGACTTCCGACTCGGTTCACAGCGTTATAAGAGCCTACGAAGCTGATTTAGCTTTGAAAG TGAGCCGGCATCGATTGGGAGAGGATAGTTATAGAACCTACCTCACAAGAACCAAAAACGTTTCTATGGCCTTTAGTGAT CGCGAAGTATTCAGTGGCATCACTTATCATCGACTCACTGACATTCTTGATGATTGGATTGCCACCAAAAGTAGCAATCA GGCTATTGAACTATTTGCTGAAATGCGTCGATTTTGGAAGTATTCATCCCCACTCTATAGCTGTGGAAAGAATATTGCCG CCAGCATTCCTGATGATTACATTTCATCAAGAGTCCAAAAGCCAACCGCTACCCGGCTATTTACAGATATTGAGTCCATC GCCAAACTTTGGATAAATATTGCCTCTTGTGCATCAGTTCACCAGAAGAACGCTATGCGGTTCATGATCCTGACAGGGGT CCGTCCAATCAATGTTTCAAATCTACGCTGGGATTATGTTGATAGCGATCTTGCTGAAATTATTTATCCCGCTGGTGTGA CGGGCATGCGGGGGGCAATGAAAACCCAGAAAGAATTTAGACTGCCAGTGACGAATGAAATAAAACGAATACTTGAAGAG CAACTGGGGTGGGGAAGGTCTGTTGATAATTACAATAAAGAGTATGTTTTTCTTCAGCCCCGCGATTTGATGAAACCGTT CGCAAAGCGCTCATTGGATAAGCTGATTAAAACGTATAGCCCAGAGAATGCAGTGAAGGGGGTGATTCATGATGGCACCG TTAAGGGCCGAGAGGGGGCGTTTAACACGATGTGTCGTAAGTTCTTGAAGAGCAATATCATTGCCCAGATGCGTTCTCGT GGTTATTCCCGCTCAGATACAAGAGAGATAAGCCAGCTCTGTATGCATCATTCTGACAAGGGAGCGGATCCGATGGGTGA GCATTACGATTTTTCAGATGAAATCCTTCATGAAGAAATGGCTTTAAAACGGCTGGCCTTTGAATCACATGAGGCCAGCA TACTTACACAGGTTGCTTTAATTCGTAAGAGACTGAGTTAA
Upstream 100 bases:
>100_bases AAGTTAGTAACACAAAACCGCAACACAAGCCGTTTTTTGTCATTAAAATACCCGCATGTGTGAGCTTGGGGTTTGGCGGG TTTCATACCAAGGAGTTTCG
Downstream 100 bases:
>100_bases TACTTGCTCTTACACTTATCGATGAATGCGATAACATTACAGCGCTCATAGCGAACCAATTTATGAGTGAATCGAATGGG TGCCAATATCGCCCTGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MVRNVTQKLATPNNDGFLTALARWEACKPPYTSSHMKICVTAAKVILSQVVQPRRSKYEKENFLRIDFSKAGKVTFYAEF PKKMALKGKKLGEWPEMAIQVAREKAKDLSEGGLTSDSVHSVIRAYEADLALKVSRHRLGEDSYRTYLTRTKNVSMAFSD REVFSGITYHRLTDILDDWIATKSSNQAIELFAEMRRFWKYSSPLYSCGKNIAASIPDDYISSRVQKPTATRLFTDIESI AKLWINIASCASVHQKNAMRFMILTGVRPINVSNLRWDYVDSDLAEIIYPAGVTGMRGAMKTQKEFRLPVTNEIKRILEE QLGWGRSVDNYNKEYVFLQPRDLMKPFAKRSLDKLIKTYSPENAVKGVIHDGTVKGREGAFNTMCRKFLKSNIIAQMRSR GYSRSDTREISQLCMHHSDKGADPMGEHYDFSDEILHEEMALKRLAFESHEASILTQVALIRKRLS
Sequences:
>Translated_466_residues MVRNVTQKLATPNNDGFLTALARWEACKPPYTSSHMKICVTAAKVILSQVVQPRRSKYEKENFLRIDFSKAGKVTFYAEF PKKMALKGKKLGEWPEMAIQVAREKAKDLSEGGLTSDSVHSVIRAYEADLALKVSRHRLGEDSYRTYLTRTKNVSMAFSD REVFSGITYHRLTDILDDWIATKSSNQAIELFAEMRRFWKYSSPLYSCGKNIAASIPDDYISSRVQKPTATRLFTDIESI AKLWINIASCASVHQKNAMRFMILTGVRPINVSNLRWDYVDSDLAEIIYPAGVTGMRGAMKTQKEFRLPVTNEIKRILEE QLGWGRSVDNYNKEYVFLQPRDLMKPFAKRSLDKLIKTYSPENAVKGVIHDGTVKGREGAFNTMCRKFLKSNIIAQMRSR GYSRSDTREISQLCMHHSDKGADPMGEHYDFSDEILHEEMALKRLAFESHEASILTQVALIRKRLS >Mature_466_residues MVRNVTQKLATPNNDGFLTALARWEACKPPYTSSHMKICVTAAKVILSQVVQPRRSKYEKENFLRIDFSKAGKVTFYAEF PKKMALKGKKLGEWPEMAIQVAREKAKDLSEGGLTSDSVHSVIRAYEADLALKVSRHRLGEDSYRTYLTRTKNVSMAFSD REVFSGITYHRLTDILDDWIATKSSNQAIELFAEMRRFWKYSSPLYSCGKNIAASIPDDYISSRVQKPTATRLFTDIESI AKLWINIASCASVHQKNAMRFMILTGVRPINVSNLRWDYVDSDLAEIIYPAGVTGMRGAMKTQKEFRLPVTNEIKRILEE QLGWGRSVDNYNKEYVFLQPRDLMKPFAKRSLDKLIKTYSPENAVKGVIHDGTVKGREGAFNTMCRKFLKSNIIAQMRSR GYSRSDTREISQLCMHHSDKGADPMGEHYDFSDEILHEEMALKRLAFESHEASILTQVALIRKRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53216; Mature: 53216
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRNVTQKLATPNNDGFLTALARWEACKPPYTSSHMKICVTAAKVILSQVVQPRRSKYEK CCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC ENFLRIDFSKAGKVTFYAEFPKKMALKGKKLGEWPEMAIQVAREKAKDLSEGGLTSDSVH CCEEEEEECCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH SVIRAYEADLALKVSRHRLGEDSYRTYLTRTKNVSMAFSDREVFSGITYHRLTDILDDWI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHCCCHHHHHHHHHHHHH ATKSSNQAIELFAEMRRFWKYSSPLYSCGKNIAASIPDDYISSRVQKPTATRLFTDIESI HCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHH AKLWINIASCASVHQKNAMRFMILTGVRPINVSNLRWDYVDSDLAEIIYPAGVTGMRGAM HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHH KTQKEFRLPVTNEIKRILEEQLGWGRSVDNYNKEYVFLQPRDLMKPFAKRSLDKLIKTYS HHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCC PENAVKGVIHDGTVKGREGAFNTMCRKFLKSNIIAQMRSRGYSRSDTREISQLCMHHSDK CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC GADPMGEHYDFSDEILHEEMALKRLAFESHEASILTQVALIRKRLS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRNVTQKLATPNNDGFLTALARWEACKPPYTSSHMKICVTAAKVILSQVVQPRRSKYEK CCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC ENFLRIDFSKAGKVTFYAEFPKKMALKGKKLGEWPEMAIQVAREKAKDLSEGGLTSDSVH CCEEEEEECCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH SVIRAYEADLALKVSRHRLGEDSYRTYLTRTKNVSMAFSDREVFSGITYHRLTDILDDWI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHCCCHHHHHHHHHHHHH ATKSSNQAIELFAEMRRFWKYSSPLYSCGKNIAASIPDDYISSRVQKPTATRLFTDIESI HCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHH AKLWINIASCASVHQKNAMRFMILTGVRPINVSNLRWDYVDSDLAEIIYPAGVTGMRGAM HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHH KTQKEFRLPVTNEIKRILEEQLGWGRSVDNYNKEYVFLQPRDLMKPFAKRSLDKLIKTYS HHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCC PENAVKGVIHDGTVKGREGAFNTMCRKFLKSNIIAQMRSRGYSRSDTREISQLCMHHSDK CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC GADPMGEHYDFSDEILHEEMALKRLAFESHEASILTQVALIRKRLS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA