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The map label for this gene is rseC [H]

Identifier: 170023431

GI number: 170023431

Start: 1320804

End: 1321259

Strand: Direct

Name: rseC [H]

Synonym: YPK_1185

Alternate gene names: 170023431

Gene position: 1320804-1321259 (Clockwise)

Preceding gene: 170023430

Following gene: 170023433

Centisome position: 28.17

GC content: 45.39

Gene sequence:

>456_bases
ATGATGAAGGAATGGGCGACGGTGATATCATGGCAAAATGGTATTGCCCTATTACGTTGTGAACCACACTCTGGTTGTGG
GAATTGCCATTCTCGCCGAGGATGTGGTAGCCATTTATTAAATGAGTTAGGGCCTGAGACCGACCATCAATTACAGGTTG
AAATTTCACAACCGCTCGAGCCAGGGCAGAAAGTTGAAGTTGGCATCAGTGAAGGGAGTTTATTACGTTCTGCATCATTG
GTTTATTTAACCCCGTTAGTTGGGTTAATTGCTGGTGGGGCACTGTTCCAGTCTTTATTTTTAACCGATGCATTTACCGC
TCTTGGGGCTATTTTAGGCGCAGGGTTAGGTTTTTTACTGGCACGAAAACTGGCAACCAGAATTGAGGGGCTCAGTGCTT
ATCAGCCTGTTATTTTGCAAATCGGTTTGCCACCAACGGCTATGCGTATTCAGTAA

Upstream 100 bases:

>100_bases
AGACTGAAGTCCGTAATAACGTCGAGATAACGGTAGTGGGTGAGTTGCCACCTTCAACGGCCAAACGTATTGCCGACAGT
GTGGTTCTGGAGTCGACAAA

Downstream 100 bases:

>100_bases
TAATAAGACGTTATTATTGATTAGGCATGATAAGCAGGAATGCGGTTCTGTATCATATGTTCGATCAAAACAATAAAAAG
ATCTGCATTGATTAAATCAG

Product: SoxR reducing system protein RseC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MMKEWATVISWQNGIALLRCEPHSGCGNCHSRRGCGSHLLNELGPETDHQLQVEISQPLEPGQKVEVGISEGSLLRSASL
VYLTPLVGLIAGGALFQSLFLTDAFTALGAILGAGLGFLLARKLATRIEGLSAYQPVILQIGLPPTAMRIQ

Sequences:

>Translated_151_residues
MMKEWATVISWQNGIALLRCEPHSGCGNCHSRRGCGSHLLNELGPETDHQLQVEISQPLEPGQKVEVGISEGSLLRSASL
VYLTPLVGLIAGGALFQSLFLTDAFTALGAILGAGLGFLLARKLATRIEGLSAYQPVILQIGLPPTAMRIQ
>Mature_151_residues
MMKEWATVISWQNGIALLRCEPHSGCGNCHSRRGCGSHLLNELGPETDHQLQVEISQPLEPGQKVEVGISEGSLLRSASL
VYLTPLVGLIAGGALFQSLFLTDAFTALGAILGAGLGFLLARKLATRIEGLSAYQPVILQIGLPPTAMRIQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=151, Percent_Identity=52.9801324503311, Blast_Score=166, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 16074; Mature: 16074

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKEWATVISWQNGIALLRCEPHSGCGNCHSRRGCGSHLLNELGPETDHQLQVEISQPLE
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCC
PGQKVEVGISEGSLLRSASLVYLTPLVGLIAGGALFQSLFLTDAFTALGAILGAGLGFLL
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARKLATRIEGLSAYQPVILQIGLPPTAMRIQ
HHHHHHHHHCCCCCCCEEEEECCCCCCEECC
>Mature Secondary Structure
MMKEWATVISWQNGIALLRCEPHSGCGNCHSRRGCGSHLLNELGPETDHQLQVEISQPLE
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCC
PGQKVEVGISEGSLLRSASLVYLTPLVGLIAGGALFQSLFLTDAFTALGAILGAGLGFLL
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARKLATRIEGLSAYQPVILQIGLPPTAMRIQ
HHHHHHHHHCCCCCCCEEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7889935; 9278503 [H]