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The map label for this gene is ybgK [H]

Identifier: 170023414

GI number: 170023414

Start: 1306472

End: 1307422

Strand: Direct

Name: ybgK [H]

Synonym: YPK_1168

Alternate gene names: 170023414

Gene position: 1306472-1307422 (Clockwise)

Preceding gene: 170023413

Following gene: 170023415

Centisome position: 27.86

GC content: 53.73

Gene sequence:

>951_bases
ATGTTGAATATCATCCGCGCAGGTATTTATACCACGGTTCAAGATGCTGGCCGTGGCGGTTTTCGCCGCTTGGGGATCAG
CCAAGGGGGAGCGTTAGATTTACCCGCGCTGAGTATGGCGAATATGCTGGTGGGTAACGCTAGCGATGCCGCTGGGTTAG
AAATCACCCTTGGGCAGTTTACAGCAGAATTTACCCAATCGGGTTGGATTGCCTTAACCGGTGCCGGTTGCGATGCCAGA
CTTGATGAACAGCGGCTCTGGACCGGCTGGTGCTATCCGGTTAAGGCCGGACAACAGTTAAAACTCAGTGTGCCGCACCG
CGGTATGCGCAGTTATCTGGCTCTTTCTGGCGGTATTATCGTGCCAGAAATACTGGGTTCACGCAGCACCGATTTGAAAG
CCGGGTTTGGTGGTCATCAGGGGCGGTTGATTAAAGAAGGCGACCGCCTGCCATTGGGTAAACCCACCCGTTTGCCCAGT
GAATCTGTTGGCGTTAAACAGCTATTATTCGGTAACCGTGTCCGTGCCGTGCCGGGACCGGAATACCATGAATTCGATGA
GGTTGCGCGGAATGCTTTTTGGCGAGAAGCCTGGCAGCTCAGTCCGCAAAGTAACCGCATGGGATACCGCCTGAGTGGCC
GCGAATTAACGCGTAACACCACGCGTGAAATGCTATCTCATGGTCTATTGCCCGGTGTGGTGCAGGTTCCCCATAACGGC
CAGCCGATTGTATTGATGGCTGATGCACAAACGACCGGCGGCTACCCACGGATTGCTTGCGTGATTGAGGCGGATCTCTA
CCACTTGGCGCAAATTCGGCTGGGTGAGCCGATACATTTTGTACCATGTACTGTGGAAGAAGCACTATGCGCCAAAAGAG
AGCAACAGCATTTCCTACAGCAAATTGAATGGGGTTTAGAGAAGGGTTTTGTTACCCCGGAGGCCCAGTGA

Upstream 100 bases:

>100_bases
TTGGTCGCACCTCACTGGCATTGTTTAATCCAGTGGCGATGCCACCGACCTTATTGCGACCTGGGGATAATGTGCGCTTT
CTGCCGCTAAAGGAGGGCGT

Downstream 100 bases:

>100_bases
AAATTGATTTAAATGCTGATTTGGGTGAGGGCTGCGCCAATGATCAGGCGCTGCTGCAATTGGTCAGTTCGGCCAACATA
GCCTGCGGTTTTCATGCAGG

Product: urea amidolyase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQFTAEFTQSGWIALTGAGCDAR
LDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGIIVPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPS
ESVGVKQLLFGNRVRAVPGPEYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALCAKREQQHFLQQIEWGLEKGFVTPEAQ

Sequences:

>Translated_316_residues
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQFTAEFTQSGWIALTGAGCDAR
LDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGIIVPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPS
ESVGVKQLLFGNRVRAVPGPEYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALCAKREQQHFLQQIEWGLEKGFVTPEAQ
>Mature_316_residues
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQFTAEFTQSGWIALTGAGCDAR
LDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGIIVPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPS
ESVGVKQLLFGNRVRAVPGPEYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALCAKREQQHFLQQIEWGLEKGFVTPEAQ

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=308, Percent_Identity=68.5064935064935, Blast_Score=444, Evalue=1e-126,
Organism=Saccharomyces cerevisiae, GI6319685, Length=325, Percent_Identity=28.3076923076923, Blast_Score=118, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 34594; Mature: 34594

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQF
CCCEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHH
TAEFTQSGWIALTGAGCDARLDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGII
HHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCEE
VPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPSESVGVKQLLFGNRVRAVPGP
EHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCC
EYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEECCCCC
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALCAKREQQHFLQ
CCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
QIEWGLEKGFVTPEAQ
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQF
CCCEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHH
TAEFTQSGWIALTGAGCDARLDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGII
HHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCEE
VPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPSESVGVKQLLFGNRVRAVPGP
EHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCC
EYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEECCCCC
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALCAKREQQHFLQ
CCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
QIEWGLEKGFVTPEAQ
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]