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The map label for this gene is ybgI [C]

Identifier: 170023411

GI number: 170023411

Start: 1304456

End: 1305202

Strand: Direct

Name: ybgI [C]

Synonym: YPK_1165

Alternate gene names: 170023411

Gene position: 1304456-1305202 (Clockwise)

Preceding gene: 170023410

Following gene: 170023413

Centisome position: 27.82

GC content: 49.67

Gene sequence:

>747_bases
ATGATGCGTAACGTTGAACTGGAAACTGTACTCAATAACCAACTGAATATCGGGGCTTTTCAAGATTATGCCCCCAATGG
TTTGCAAGTTGAGGGGCGGCGGGATATCCAGCGGGTTGTTACTGGTGTGACCGCCAGTCAGGCGTTGCTGGATGCGGCAG
TTGCGCATCAGGCCGATGCTATTTTAGTCCATCATGGCTATTTCTGGAAAAATGAACCGGTAGTGGTGCGGGGGATGAAA
CGCAACCGCTTAAAAACACTGTTGACCCACGATATCAATCTGTACGGTTACCACTTACCGCTGGATGCACATCCCGAACT
TGGCAATAACGCCCAATTGGCTAAATTGCTGGAGATACAGGTCTTGGGTGAAATCGAATCTTTGTTGCCCTACGGTGAGT
TCACCACGCCGCTGAATGCCGTCGCTTTACGTGAGCGTCTGGAAAAACAGTTGGGGCGCAGTGTATTACATTGTGGTGAT
CGGGCGCCCGCAGAGGTACGCCGTATTGCCTGGTGTACGGGCGGCGGGCAGGGGTATATCCAACAAGCGGCTGAGTTCGG
TGTCGATGCATTTATAACGGGTGAAGTTTCTGAGCAAACAATTCATATAGCCCGTGAGATGAAAGTGAATTTTTATGCGG
CAGGGCATCATGCGACTGAACGTTATGGTATTAAAGCGCTGGGTGAATGGCTGGCTGAACAACATCAATTAGATGTTACC
TTTATTGATATTCCTAACCCTGCCTGA

Upstream 100 bases:

>100_bases
TAGGATGAAAATAGCTATATGACAAAAATAGCTAGGTGACAAAAATAGTCCCCGCGCTGTATTTATACTGATTAATTGAC
ACTGACCTGATGAGATTGAA

Downstream 100 bases:

>100_bases
GTTAGGGGATAGGGCTATTTTCGCCGATGTTTAGCATCGGCGTGTCTCCGTCTTACATGGCGCTGCCGGGCGATTAAGTG
GCGTTTATGTTCCTGGCTGA

Product: putative hydrolase-oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MMRNVELETVLNNQLNIGAFQDYAPNGLQVEGRRDIQRVVTGVTASQALLDAAVAHQADAILVHHGYFWKNEPVVVRGMK
RNRLKTLLTHDINLYGYHLPLDAHPELGNNAQLAKLLEIQVLGEIESLLPYGEFTTPLNAVALRERLEKQLGRSVLHCGD
RAPAEVRRIAWCTGGGQGYIQQAAEFGVDAFITGEVSEQTIHIAREMKVNFYAAGHHATERYGIKALGEWLAEQHQLDVT
FIDIPNPA

Sequences:

>Translated_248_residues
MMRNVELETVLNNQLNIGAFQDYAPNGLQVEGRRDIQRVVTGVTASQALLDAAVAHQADAILVHHGYFWKNEPVVVRGMK
RNRLKTLLTHDINLYGYHLPLDAHPELGNNAQLAKLLEIQVLGEIESLLPYGEFTTPLNAVALRERLEKQLGRSVLHCGD
RAPAEVRRIAWCTGGGQGYIQQAAEFGVDAFITGEVSEQTIHIAREMKVNFYAAGHHATERYGIKALGEWLAEQHQLDVT
FIDIPNPA
>Mature_248_residues
MMRNVELETVLNNQLNIGAFQDYAPNGLQVEGRRDIQRVVTGVTASQALLDAAVAHQADAILVHHGYFWKNEPVVVRGMK
RNRLKTLLTHDINLYGYHLPLDAHPELGNNAQLAKLLEIQVLGEIESLLPYGEFTTPLNAVALRERLEKQLGRSVLHCGD
RAPAEVRRIAWCTGGGQGYIQQAAEFGVDAFITGEVSEQTIHIAREMKVNFYAAGHHATERYGIKALGEWLAEQHQLDVT
FIDIPNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=247, Percent_Identity=69.2307692307692, Blast_Score=359, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27591; Mature: 27591

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRNVELETVLNNQLNIGAFQDYAPNGLQVEGRRDIQRVVTGVTASQALLDAAVAHQADA
CCCCCCHHHHHCCCCCCCEECCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCE
ILVHHGYFWKNEPVVVRGMKRNRLKTLLTHDINLYGYHLPLDAHPELGNNAQLAKLLEIQ
EEEECCEEECCCCEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
VLGEIESLLPYGEFTTPLNAVALRERLEKQLGRSVLHCGDRAPAEVRRIAWCTGGGQGYI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCHHH
QQAAEFGVDAFITGEVSEQTIHIAREMKVNFYAAGHHATERYGIKALGEWLAEQHQLDVT
HHHHHCCCCEEEECCCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEE
FIDIPNPA
EEECCCCC
>Mature Secondary Structure
MMRNVELETVLNNQLNIGAFQDYAPNGLQVEGRRDIQRVVTGVTASQALLDAAVAHQADA
CCCCCCHHHHHCCCCCCCEECCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCE
ILVHHGYFWKNEPVVVRGMKRNRLKTLLTHDINLYGYHLPLDAHPELGNNAQLAKLLEIQ
EEEECCEEECCCCEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
VLGEIESLLPYGEFTTPLNAVALRERLEKQLGRSVLHCGDRAPAEVRRIAWCTGGGQGYI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCHHH
QQAAEFGVDAFITGEVSEQTIHIAREMKVNFYAAGHHATERYGIKALGEWLAEQHQLDVT
HHHHHCCCCEEEECCCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEE
FIDIPNPA
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]