Click here to switch to the map view.

The map label for this gene is ureF [H]

Identifier: 170023381

GI number: 170023381

Start: 1273841

End: 1274527

Strand: Direct

Name: ureF [H]

Synonym: YPK_1135

Alternate gene names: 170023381

Gene position: 1273841-1274527 (Clockwise)

Preceding gene: 170023380

Following gene: 170023382

Centisome position: 27.16

GC content: 48.91

Gene sequence:

>687_bases
ATGAACGCATCAGATCTCATTCGTATCATGCAATTTGGTGATTCCGTACTGCCGGTCGGGGCCTTTACGTTTTCCAATGG
CGTGGAATCTGCCATTCAAACCGGCATCGTTCATGATGTAGCAACATTGAAAGGCTTCGTTTTGACCGCGTTGAAGCAGG
CGGCCAGTTGTGACGGTATGGGCGTTGTCGCAGCTCATCGTGCTGTTGTGGCAGATGACCGTGATGGCATTATCCGTGCT
GATTGGGCGGTTAATAATCGTAAGTTAAATGAAGAAAGCCGCCTGATGGCAACCCGCATGGGTAAAAAGCTGGCAGAAAT
GTCGATTCATGTGGTGGAGCACCCATTGATCAGTTGGTGGTTGGAACAAATCAAAAATGGCAACACGGCGGGCACCTATC
CGGTGACTCAAGCGGTGGTTATGGCAGCACAAGGGATCGGGCAGCGGGAAGTGGTTGTGATGCATCAATACGGTGTGGCA
ATGACCATTTTAAGTGCGGCAATGCGCTTGATGCGCGTTACGCATTTCGATACACAGCATATCTTATTTGAACTGAACCA
TGACATTGAGAAATTCTGCGATATTGCCGAAATCGGCGATATCAACCAGATGTCTTCTTATGTCCCGATTGTGGATGTTT
TGGCCGCCGTACATGTGAAAGCCCATGTTCGCCTCTTTAGTAACTGA

Upstream 100 bases:

>100_bases
AGAAGGCCACAGTCATGGTGATCACGATCATGACCACAGCCATAGCCATGGTGATCATGACCACGACCATAAACACTGAT
TCAGGCAGCGAGGCACCGCG

Downstream 100 bases:

>100_bases
GTGACTGCGGTGTGAACGATCGAGACATGAATAATGTACCGATAAAAATGAATTCAGGGTGCTGCGGTGAGGTGTTAGCC
GAGTACCTACCCCAAATCAG

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGMGVVAAHRAVVADDRDGIIRA
DWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWWLEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVA
MTILSAAMRLMRVTHFDTQHILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHVRLFSN

Sequences:

>Translated_228_residues
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGMGVVAAHRAVVADDRDGIIRA
DWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWWLEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVA
MTILSAAMRLMRVTHFDTQHILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHVRLFSN
>Mature_228_residues
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGMGVVAAHRAVVADDRDGIIRA
DWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWWLEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVA
MTILSAAMRLMRVTHFDTQHILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHVRLFSN

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 25009; Mature: 25009

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGM
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GVVAAHRAVVADDRDGIIRADWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWW
CHHHHHHHHEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVAMTILSAAMRLMRVTHFDTQH
HHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHH
ILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHVRLFSN
HHHHHCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGM
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GVVAAHRAVVADDRDGIIRADWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWW
CHHHHHHHHEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVAMTILSAAMRLMRVTHFDTQH
HHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHH
ILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHVRLFSN
HHHHHCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA