| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is ureB [H]
Identifier: 170023378
GI number: 170023378
Start: 1270544
End: 1271020
Strand: Direct
Name: ureB [H]
Synonym: YPK_1132
Alternate gene names: 170023378
Gene position: 1270544-1271020 (Clockwise)
Preceding gene: 170023377
Following gene: 170023379
Centisome position: 27.09
GC content: 49.27
Gene sequence:
>477_bases ATGCGAGTAAAACCTGAACTGATTATTGCAGAGGATTCAAGCATGAGCGCGAAGAAAAGTACGAAAGACAGTAAAGAACA GAATACGCCACTGGGTGGCCTCGTTTTAGCGGAGACACCAATTACGTTTAACGAAAATAAACCCGTGACCAAAGTTAAAG TCCGCAATACCGGTGACCGGCCAATTCAGGTTGGGTCCCATTTCCATTTCTTCGAGGTTAACCGCGCACTGGAATTTGAT CGTGCAGCGGCTTATGGCAAGCGCCTCAATATCTCCTCGACGACGGCTATCCGTTTTGAACCCGGTGATGAAACTGAAGT TCCGCTTATCCCCTTTGGCGGCAAGCAGACACTGTATGGTTTTAACAATCTTGTCGATGGGTGGACCGGTGAGGGTGTGG TACCCAACAGTGAGCGCCCGGATAAACTCGCGGCTATCCGCCTTGCCGCCGAGCGTGGTTTTAAATCATCTAAATAA
Upstream 100 bases:
>100_bases GGGGTGGCAGATTTGATCCCGAATGTTCAGGTTGAGGCGATTTTTACCGATGGCAGCCGTCTGGTCACGGTACACGACCC TATTAAGTAGTGACGGCAAC
Downstream 100 bases:
>100_bases CGCCTTGTTTACAGAGCAAATCATCGAAATTCGCATACGTGTAATGGGGTAAAGCAGTTACACGCACCGGAAAAAGAAAG GAGCGACAGATGCCTCAAAT
Product: urease subunit beta
Products: NA
Alternate protein names: Urea amidohydrolase subunit beta [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRVKPELIIAEDSSMSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDRPIQVGSHFHFFEVNRALEFD RAAAYGKRLNISSTTAIRFEPGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK
Sequences:
>Translated_158_residues MRVKPELIIAEDSSMSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDRPIQVGSHFHFFEVNRALEFD RAAAYGKRLNISSTTAIRFEPGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK >Mature_158_residues MRVKPELIIAEDSSMSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDRPIQVGSHFHFFEVNRALEFD RAAAYGKRLNISSTTAIRFEPGDETEVPLIPFGGKQTLYGFNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK
Specific function: Unknown
COG id: COG0832
COG function: function code E; Urea amidohydrolase (urease) beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002019 [H]
Pfam domain/function: PF00699 Urease_beta [H]
EC number: =3.5.1.5 [H]
Molecular weight: Translated: 17392; Mature: 17392
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVKPELIIAEDSSMSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDR CCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCEEEEECCCEEECCCCCEEEEEEECCCCC PIQVGSHFHFFEVNRALEFDRAAAYGKRLNISSTTAIRFEPGDETEVPLIPFGGKQTLYG EEEECCEEEEEEECCHHCHHHHHHCCCEECCCCCEEEEECCCCCCCCCEEECCCCEEECC FNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK CCCCCCCCCCCCCCCCCCCCCHHHEEEEHHHCCCCCCC >Mature Secondary Structure MRVKPELIIAEDSSMSAKKSTKDSKEQNTPLGGLVLAETPITFNENKPVTKVKVRNTGDR CCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCEEEEECCCEEECCCCCEEEEEEECCCCC PIQVGSHFHFFEVNRALEFDRAAAYGKRLNISSTTAIRFEPGDETEVPLIPFGGKQTLYG EEEECCEEEEEEECCHHCHHHHHHCCCEECCCCCEEEEECCCCCCCCCEEECCCCEEECC FNNLVDGWTGEGVVPNSERPDKLAAIRLAAERGFKSSK CCCCCCCCCCCCCCCCCCCCCHHHEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA