Click here to switch to the map view.

The map label for this gene is 170023357

Identifier: 170023357

GI number: 170023357

Start: 1250820

End: 1251770

Strand: Direct

Name: 170023357

Synonym: YPK_1111

Alternate gene names: NA

Gene position: 1250820-1251770 (Clockwise)

Preceding gene: 170023355

Following gene: 170023358

Centisome position: 26.67

GC content: 49.84

Gene sequence:

>951_bases
ATGCATAAGACTGAACTTAATCATGATTATCCACGGGATTTGGCCGGTTACGGTGGCCAACCCCCAGTCGCTAACTGGCC
GGGGCAGGCACGTATTGCGGTGCAATTTGTCCTGAATATTGAAGAAGGTGCGGAAAATAACGTTCTACATGGCGATGCGG
GATCTGAACAATTTCTTTCCGATATTATCGGTGCGGACAGTTATCCCGATAGGCATATGTCGATGGAGTCACTTTACGAA
TATGGAACTCGTGCTGGCTTCTGGCGTATCCATCAGGAGTTTGTTTCTCGGGGGCTGCCTATGACGGTCTTTGGTGTCGC
CATGGCATTGGAGCGTAATCCATTGATTGTCGAAGCGATTAAGTGTGCGGGTTATGATGTGGTTTGCCATGGCTGGCGTT
GGCTCCATTATCAACACGTCGATGAGCAAACTGAACGTGAGCATATGCAGCGGGCCATCAAGATATTACATGATTTATTC
GGCCAACCCCCTGCAGGCTGGTATACCGGGCGTGATAGCCCAAATACCCGGCGGCTGGTGGTGGAGAATGGTCACCTTCT
GTACGACAGCGATTATTATGGCGATGATTTGCCCTTTTGGTCGCAGGTCAGGGGAGTTGATGGCAGTACCACCCCACATC
TGGTCGTGCCTTATACACTGGATGCCAATGATATGCGTTTTGCCTCAGCACAGGGATTTAACTCCAGTGAGCAGTTTTAT
ACCTATTTAAAAGACAGCTTCGATGTGTTGTACGCAGAGGGTGAAACTGCACCTAAAATGATGTCAGTGGAGATGCACTG
TCGGTTATTAGGGCGCCCTGGACGTTTCCGGGCTTTGCAGCGCTTTTTGGATTATATCCAGCAACACGAAAGGGTGTGGG
TTTGTCGGCGTCAAGAGATTGCGGAGCATTGGGTTAAACATCACCCGTTTGAAGGTATCAATGGCCGGTAG

Upstream 100 bases:

>100_bases
GGGTTGGAAGGCAACAAAGGGATGGAAGGCAGCAAAGGTGATGATGTGGGATGTCTTGCCGTTTCAACGAGTCAGTGGAT
AGACATAATGGAGTATGCCA

Downstream 100 bases:

>100_bases
GGATAAAAAACAGATACCCGAAAGTATCTGTCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAGGATAGG
CAGAGGAGTAAAGCGTCCGC

Product: urate catabolism protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Deacetylase

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MHKTELNHDYPRDLAGYGGQPPVANWPGQARIAVQFVLNIEEGAENNVLHGDAGSEQFLSDIIGADSYPDRHMSMESLYE
YGTRAGFWRIHQEFVSRGLPMTVFGVAMALERNPLIVEAIKCAGYDVVCHGWRWLHYQHVDEQTEREHMQRAIKILHDLF
GQPPAGWYTGRDSPNTRRLVVENGHLLYDSDYYGDDLPFWSQVRGVDGSTTPHLVVPYTLDANDMRFASAQGFNSSEQFY
TYLKDSFDVLYAEGETAPKMMSVEMHCRLLGRPGRFRALQRFLDYIQQHERVWVCRRQEIAEHWVKHHPFEGINGR

Sequences:

>Translated_316_residues
MHKTELNHDYPRDLAGYGGQPPVANWPGQARIAVQFVLNIEEGAENNVLHGDAGSEQFLSDIIGADSYPDRHMSMESLYE
YGTRAGFWRIHQEFVSRGLPMTVFGVAMALERNPLIVEAIKCAGYDVVCHGWRWLHYQHVDEQTEREHMQRAIKILHDLF
GQPPAGWYTGRDSPNTRRLVVENGHLLYDSDYYGDDLPFWSQVRGVDGSTTPHLVVPYTLDANDMRFASAQGFNSSEQFY
TYLKDSFDVLYAEGETAPKMMSVEMHCRLLGRPGRFRALQRFLDYIQQHERVWVCRRQEIAEHWVKHHPFEGINGR
>Mature_316_residues
MHKTELNHDYPRDLAGYGGQPPVANWPGQARIAVQFVLNIEEGAENNVLHGDAGSEQFLSDIIGADSYPDRHMSMESLYE
YGTRAGFWRIHQEFVSRGLPMTVFGVAMALERNPLIVEAIKCAGYDVVCHGWRWLHYQHVDEQTEREHMQRAIKILHDLF
GQPPAGWYTGRDSPNTRRLVVENGHLLYDSDYYGDDLPFWSQVRGVDGSTTPHLVVPYTLDANDMRFASAQGFNSSEQFY
TYLKDSFDVLYAEGETAPKMMSVEMHCRLLGRPGRFRALQRFLDYIQQHERVWVCRRQEIAEHWVKHHPFEGINGR

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36460; Mature: 36460

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKTELNHDYPRDLAGYGGQPPVANWPGQARIAVQFVLNIEEGAENNVLHGDAGSEQFLS
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCCHHHHHH
DIIGADSYPDRHMSMESLYEYGTRAGFWRIHQEFVSRGLPMTVFGVAMALERNPLIVEAI
HHHCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHH
KCAGYDVVCHGWRWLHYQHVDEQTEREHMQRAIKILHDLFGQPPAGWYTGRDSPNTRRLV
HHCCCEEEECCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
VENGHLLYDSDYYGDDLPFWSQVRGVDGSTTPHLVVPYTLDANDMRFASAQGFNSSEQFY
EECCEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHH
TYLKDSFDVLYAEGETAPKMMSVEMHCRLLGRPGRFRALQRFLDYIQQHERVWVCRRQEI
HHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEHWVKHHPFEGINGR
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHKTELNHDYPRDLAGYGGQPPVANWPGQARIAVQFVLNIEEGAENNVLHGDAGSEQFLS
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCCHHHHHH
DIIGADSYPDRHMSMESLYEYGTRAGFWRIHQEFVSRGLPMTVFGVAMALERNPLIVEAI
HHHCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHH
KCAGYDVVCHGWRWLHYQHVDEQTEREHMQRAIKILHDLFGQPPAGWYTGRDSPNTRRLV
HHCCCEEEECCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
VENGHLLYDSDYYGDDLPFWSQVRGVDGSTTPHLVVPYTLDANDMRFASAQGFNSSEQFY
EECCEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHH
TYLKDSFDVLYAEGETAPKMMSVEMHCRLLGRPGRFRALQRFLDYIQQHERVWVCRRQEI
HHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEHWVKHHPFEGINGR
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA