| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023279
Identifier: 170023279
GI number: 170023279
Start: 1158393
End: 1158644
Strand: Direct
Name: 170023279
Synonym: YPK_1030
Alternate gene names: NA
Gene position: 1158393-1158644 (Clockwise)
Preceding gene: 170023277
Following gene: 170023282
Centisome position: 24.7
GC content: 39.68
Gene sequence:
>252_bases ATGCTTGAAGGCTTACCGGACCAATTTTATGAAGCCTTTATTGAATGCATCCAGTGCCAGACTGAAGATGGAAAACAAAG GCTAGACATTTCTCATAAATTTAAGATAGCCGCTGATTCTGAGTATCAGAATTTCCAACCTGCAGATGACTTATATCCTG CCCAATGTATAGAACAAGCCCTTGAAGGAAAACAATGGAGCAAAGCGAGATTAACATTTAGCCCTGATAACGCATCTTTT TCATGGCAGTAA
Upstream 100 bases:
>100_bases GAGTCTGTTTAATACACTTCACCGTTTAACCTCAACTTCCACAGCGAACGAGTTAACAAAGCACACTCCTGAGCAATTAC TTGTCTGGGCGCAAGGATGT
Downstream 100 bases:
>100_bases TAATATATATGTACGATTCCATCTGAGATTTCCCATACCCGTTTCACCCACTAAATACTGACATCAACAATTACGTCGTT GACCAAAAATGAAACTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MLEGLPDQFYEAFIECIQCQTEDGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQALEGKQWSKARLTFSPDNASF SWQ
Sequences:
>Translated_83_residues MLEGLPDQFYEAFIECIQCQTEDGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQALEGKQWSKARLTFSPDNASF SWQ >Mature_83_residues MLEGLPDQFYEAFIECIQCQTEDGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQALEGKQWSKARLTFSPDNASF SWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9611; Mature: 9611
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEGLPDQFYEAFIECIQCQTEDGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQA CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH LEGKQWSKARLTFSPDNASFSWQ HCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MLEGLPDQFYEAFIECIQCQTEDGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQA CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH LEGKQWSKARLTFSPDNASFSWQ HCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA