| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023264
Identifier: 170023264
GI number: 170023264
Start: 1140309
End: 1140674
Strand: Reverse
Name: 170023264
Synonym: YPK_1015
Alternate gene names: NA
Gene position: 1140674-1140309 (Counterclockwise)
Preceding gene: 170023268
Following gene: 170023249
Centisome position: 24.32
GC content: 29.78
Gene sequence:
>366_bases ATGCCAAATTCAAATATAAAATTAATGGTATTTTTTGCACCTATATTATTTGGTTGCCAAATAAATAGTGAAGAAAAAAA ACCTAACGAGGAGATAATCAATCAACTCACCGCTCTGACGGCTGGATTACGTTTTTTAAAAGAAGACTGCAACCTCAAAA AAATTCCAAATGAACAAGAGATTATTAACTCTGCAATTAAAATAGCCAATCTGAAGGGTGAAATTATGACATCTAAACAT AACAATAAGATCATAAAGAAAAGTGAATCTCTATATCAAGATATCAAATCAGATTTGACTGCTAAAAATACTAAGTGTCT GGAGTTAGAGGAGCTATTAACCCCATTTATTAAGAAAATAAATTAG
Upstream 100 bases:
>100_bases AAAAACATAAAAAACAATCTCATCCATTATAATTTGTTATTGTCACCATCCTTATTCTATGCTTTTATTATAAAACAATT CATTTACACTAGAGATAATC
Downstream 100 bases:
>100_bases TCACATGACTCCCAAGAAACAGGTATAGAACACCCGCCAATGAAATATAAGGGCCAAATGCGATGTAATTAATCTCTTTT CCATTATCTTTTTTATCAAA
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPNSNIKLMVFFAPILFGCQINSEEKKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQEIINSAIKIANLKGEIMTSKH NNKIIKKSESLYQDIKSDLTAKNTKCLELEELLTPFIKKIN
Sequences:
>Translated_121_residues MPNSNIKLMVFFAPILFGCQINSEEKKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQEIINSAIKIANLKGEIMTSKH NNKIIKKSESLYQDIKSDLTAKNTKCLELEELLTPFIKKIN >Mature_120_residues PNSNIKLMVFFAPILFGCQINSEEKKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQEIINSAIKIANLKGEIMTSKHN NKIIKKSESLYQDIKSDLTAKNTKCLELEELLTPFIKKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13776; Mature: 13645
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSNIKLMVFFAPILFGCQINSEEKKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQE CCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IINSAIKIANLKGEIMTSKHNNKIIKKSESLYQDIKSDLTAKNTKCLELEELLTPFIKKI HHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC N C >Mature Secondary Structure PNSNIKLMVFFAPILFGCQINSEEKKPNEEIINQLTALTAGLRFLKEDCNLKKIPNEQE CCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IINSAIKIANLKGEIMTSKHNNKIIKKSESLYQDIKSDLTAKNTKCLELEELLTPFIKKI HHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA