| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023248
Identifier: 170023248
GI number: 170023248
Start: 1125461
End: 1126411
Strand: Reverse
Name: 170023248
Synonym: YPK_0999
Alternate gene names: NA
Gene position: 1126411-1125461 (Counterclockwise)
Preceding gene: 170023249
Following gene: 170023247
Centisome position: 24.02
GC content: 45.64
Gene sequence:
>951_bases ATGAAAGCGAAGTTGTTAATCACCTCTGGAAAGTTGTTAGTCACCTCTGGAACTGCGGCCTGCCTGGGAATTATGGCTGC CTTGATGCCCGCTGATGTTCAGGCAGCACAAGTGAATGCAACCCTCAGTTGGGTAACGGGGGATTATGGTACAACTTACG ATTACAGCGGTCCACGTCTGGATATGACGATCAACCCAGATGGCTCTAACTGGTACTACGATCTCGGTTTTCGTAAGCAG TTGCATGATACGGACCAACGTTATCAGCGTATGGAAGTAAGTGCCGGCTATCGTTTCCGTTTTGCTGAAGGTTGGGTCCA GCCCAGTTTTCGTCTCCGTGAAGATTTAAGCACCTATGCGAGTGGCAACCGCACCACCATTAATTTTTATGATGCCAAAG TTGCGGGACAATATCAGTTATCAGAACGTTTCGCCTTTGTCGGTAACATGATAGTAGGGATGGAGCGCGAAGAAGCGAAC ACCGCGTCTAACTTAGTTGAGCGGAATTCTGATCGTCTGTCCTGGGAGATTGAGCCAGGTATCCGTTTTAAATCCAGCGC CAATACACAGATGACACTGAACTATTTTAATGCGGGTAAACGTAGCGATAAGGGTGAAACTTGGGGGTTATCTGATGACT CGAAAAACCAACAGGTCCGTTTCTACTTCAACTGGAATACGCCAATTGGTCTGGTGTTAACACCTTATGCACGTTACTCC CTGGATTATGGTGAAACCTCTGGCTGGTACGAAAGTGCGGCATTCAGTGAAACGAAAACCATGAGTAAAGTTGATCGTTT GGCATTACAGTTAGCTTACCCATTATCAGATACTTTCCGCCTTCAAGCCGAATATTATATTGAAAATGTGAAATATCAAG AAGGCTATACAATGGGTAAAGATGACTCACGGGTGAAATACATGAGAGTAGGTGTAAGGGCAACATTCTAA
Upstream 100 bases:
>100_bases CGGTCAAAAAATTTCCGGTAACGGAGCTATCGATGCTGGAACCTCTCTTCATATCCCGCAATGTAGCGTATTTCTATAAT TACAAGGATTACATGTCATT
Downstream 100 bases:
>100_bases ATTAATGAATACACCTTTTTACTTAAAGCGGCACTGATGTCATTTGCAGCTTAAAATAATCTGGCCACACCTCTTTACAT TCATTTTTATTCCTGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKAKLLITSGKLLVTSGTAACLGIMAALMPADVQAAQVNATLSWVTGDYGTTYDYSGPRLDMTINPDGSNWYYDLGFRKQ LHDTDQRYQRMEVSAGYRFRFAEGWVQPSFRLREDLSTYASGNRTTINFYDAKVAGQYQLSERFAFVGNMIVGMEREEAN TASNLVERNSDRLSWEIEPGIRFKSSANTQMTLNYFNAGKRSDKGETWGLSDDSKNQQVRFYFNWNTPIGLVLTPYARYS LDYGETSGWYESAAFSETKTMSKVDRLALQLAYPLSDTFRLQAEYYIENVKYQEGYTMGKDDSRVKYMRVGVRATF
Sequences:
>Translated_316_residues MKAKLLITSGKLLVTSGTAACLGIMAALMPADVQAAQVNATLSWVTGDYGTTYDYSGPRLDMTINPDGSNWYYDLGFRKQ LHDTDQRYQRMEVSAGYRFRFAEGWVQPSFRLREDLSTYASGNRTTINFYDAKVAGQYQLSERFAFVGNMIVGMEREEAN TASNLVERNSDRLSWEIEPGIRFKSSANTQMTLNYFNAGKRSDKGETWGLSDDSKNQQVRFYFNWNTPIGLVLTPYARYS LDYGETSGWYESAAFSETKTMSKVDRLALQLAYPLSDTFRLQAEYYIENVKYQEGYTMGKDDSRVKYMRVGVRATF >Mature_316_residues MKAKLLITSGKLLVTSGTAACLGIMAALMPADVQAAQVNATLSWVTGDYGTTYDYSGPRLDMTINPDGSNWYYDLGFRKQ LHDTDQRYQRMEVSAGYRFRFAEGWVQPSFRLREDLSTYASGNRTTINFYDAKVAGQYQLSERFAFVGNMIVGMEREEAN TASNLVERNSDRLSWEIEPGIRFKSSANTQMTLNYFNAGKRSDKGETWGLSDDSKNQQVRFYFNWNTPIGLVLTPYARYS LDYGETSGWYESAAFSETKTMSKVDRLALQLAYPLSDTFRLQAEYYIENVKYQEGYTMGKDDSRVKYMRVGVRATF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36018; Mature: 36018
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKLLITSGKLLVTSGTAACLGIMAALMPADVQAAQVNATLSWVTGDYGTTYDYSGPRL CCEEEEEECCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEECCCCCEE DMTINPDGSNWYYDLGFRKQLHDTDQRYQRMEVSAGYRFRFAEGWVQPSFRLREDLSTYA EEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHH SGNRTTINFYDAKVAGQYQLSERFAFVGNMIVGMEREEANTASNLVERNSDRLSWEIEPG CCCEEEEEEEECEECCCEEHHHHHHHHHHEEEEECHHHHHHHHHHHHCCCCCEEEEECCC IRFKSSANTQMTLNYFNAGKRSDKGETWGLSDDSKNQQVRFYFNWNTPIGLVLTPYARYS EEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHEE LDYGETSGWYESAAFSETKTMSKVDRLALQLAYPLSDTFRLQAEYYIENVKYQEGYTMGK ECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEECEEECCCCCCCC DDSRVKYMRVGVRATF CCCCEEEEEEEEEECC >Mature Secondary Structure MKAKLLITSGKLLVTSGTAACLGIMAALMPADVQAAQVNATLSWVTGDYGTTYDYSGPRL CCEEEEEECCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEECCCCCEE DMTINPDGSNWYYDLGFRKQLHDTDQRYQRMEVSAGYRFRFAEGWVQPSFRLREDLSTYA EEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHH SGNRTTINFYDAKVAGQYQLSERFAFVGNMIVGMEREEANTASNLVERNSDRLSWEIEPG CCCEEEEEEEECEECCCEEHHHHHHHHHHEEEEECHHHHHHHHHHHHCCCCCEEEEECCC IRFKSSANTQMTLNYFNAGKRSDKGETWGLSDDSKNQQVRFYFNWNTPIGLVLTPYARYS EEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHEE LDYGETSGWYESAAFSETKTMSKVDRLALQLAYPLSDTFRLQAEYYIENVKYQEGYTMGK ECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEECEEECCCCCCCC DDSRVKYMRVGVRATF CCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA