| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023232
Identifier: 170023232
GI number: 170023232
Start: 1103362
End: 1104849
Strand: Reverse
Name: 170023232
Synonym: YPK_0983
Alternate gene names: NA
Gene position: 1104849-1103362 (Counterclockwise)
Preceding gene: 170023233
Following gene: 170023231
Centisome position: 23.56
GC content: 50.0
Gene sequence:
>1488_bases ATGAGTGTTGATATTAGCGCCAAACCCCGTCCGATCATTCCTTATGAACATCCTAATGCGGCGATGTATTACCAGTTGTT TAAACAACATATGATCCGCCAGTGGCATAAAAAACGGCCTTATGCGAGACATGATGCGCGCTTACAAGCCCTGTTTCAGA ATCAAAAGGTGTCGCTGCAAAGCCAGTGTGATTACCTGGTGCGTTATGTGGCTGAAGCATTTGATCATTATGCCGTCTGG GATTATACCCATGCTTATTATCCGGGGCGCCCCAGCCAGCAAAATGCGCGCACGGATGCACTGGAAGGCGTAAGCCGTGT CCTGCCGACGCTAGCGGCCTGGTTACACAGCCAACCTACGGGGCTGGATAATACGCGACTTGCTGATCTGAAAGGCGGGG AGCTCGACATTGTGGCTATCTTACGTCGCGCGTTCTTAGCCGGGACTGACCCGACCCATCGTGGATATTGGGGCACGCTG CATGATTATGATCAGCGTATTTGTGAAAGTGCAGACTTGGCATTGGCTTTATGGTTGAGCCGTGAGTCGGTCTGGCAGGC GTTTACGCCACCAGAACAGCAACAAGTGACACGCTGGTTCAGCCAGGTTAATACGCTGCAAACGGTGGATAATAACTGGC ATCTCTTCCCGTTAACGGTTCAGTTTGTGATGCGATCACTGAACGGCACTGGCGATATCAGTGATGATAAATACCAGCGC ATCAAAGAGTTCCATGTCGGTGAGGGCTGGTTTCGCGACGGAGCACAGGGCAATTATGATTACTATAACGCTTGGGGATT CCACTACTCTCTCTATTGGCTCGATCAAATAAATCCGGATTATGACCGACAGTTTATTCGTTCCTGCATGGCAGAATTCG TCGCCGCTTATCGCTATCTGATCACCCCACAAGGGATCCCCTGCTTTGGCCGTAGTGCCTGTTATCGCCTGGCGGTATCA GCGCCGTTACTGGCGGTGGCCAGTCACTCAACAGACCCCGTTCATACCGGTGAAGCCAAAAGAGCATTAGAAGCCACACT GCGTTATTTCATTGGTCACGGAGCCATGCGCTTCGGTGCTCCCACACAGGGATTATTCGCAGATGATGAAAGGCTGGTGG ACAACTACAGTGGGCCAGCTAGCAGTTTTTGGTCACTGCGGGCGTTGAATATTGCGCTGTATTGCGCCAATGACTGTGGG TTATGGCAGTGTGAAAGTAGCAAATTACCTGTCGAGACCGAGGATTTTAGTTTCACTATTAATGCCATCGATCTCTTTGT TATGGGAACTTTCGAAACGAAAGAGGTGATTGTTACTTTTCGTCATGATTACACCAAAGAGCAGACACCACTGACCCGTC GTTTAGTGTCACAACCGTGGTTAGAGCGTGTGAAAGAGAACGTTACTGGCCGTGCTGAACGGCCGAAAAACAATTTACTC CGCAAAGGCGTAACCAGCTACAGCTCAAAAATGACGTCACTCTTTTAA
Upstream 100 bases:
>100_bases ATAAGGTGGAGCGAGTGTTCTTAGCCCCCTCTTTTATCCCCTCTTACCCCTCTTTTTATTACCGTTCTCCTTATCCTAGT GACTTGCAGGAACACTGCTC
Downstream 100 bases:
>100_bases CTGCGTTTACTTTCGATGTGATGCAAATCTCTTTTATTTGATTTCTTTTTGTTTGTGTAAGCTTTTTTTTATGGTTAAAT GAAAGGAAATGAAATCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVW DYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTGLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTL HDYDQRICESADLALALWLSRESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPCFGRSACYRLAVS APLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCG LWQCESSKLPVETEDFSFTINAIDLFVMGTFETKEVIVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL RKGVTSYSSKMTSLF
Sequences:
>Translated_495_residues MSVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVW DYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTGLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTL HDYDQRICESADLALALWLSRESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPCFGRSACYRLAVS APLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCG LWQCESSKLPVETEDFSFTINAIDLFVMGTFETKEVIVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL RKGVTSYSSKMTSLF >Mature_494_residues SVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVWD YTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTGLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLH DYDQRICESADLALALWLSRESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQRI KEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPCFGRSACYRLAVSA PLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGL WQCESSKLPVETEDFSFTINAIDLFVMGTFETKEVIVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLLR KGVTSYSSKMTSLF
Specific function: Unknown
COG id: COG4289
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56990; Mature: 56859
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH SQCDYLVRYVAEAFDHYAVWDYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPT HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLHDYDQRICESADLALALWLS CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHH RESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHH IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYL HHHHHCCCCHHCCCCCCCCCCEEECEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ITPQGIPCFGRSACYRLAVSAPLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGA CCCCCCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC PTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGLWQCESSKLPVETEDFSFTI CCCCCCCCCHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEE NAIDLFVMGTFETKEVIVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL EEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RKGVTSYSSKMTSLF HHHHHHHHHHHHHCC >Mature Secondary Structure SVDISAKPRPIIPYEHPNAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH SQCDYLVRYVAEAFDHYAVWDYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPT HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLHDYDQRICESADLALALWLS CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHH RESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHH IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYL HHHHHCCCCHHCCCCCCCCCCEEECEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ITPQGIPCFGRSACYRLAVSAPLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGA CCCCCCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC PTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGLWQCESSKLPVETEDFSFTI CCCCCCCCCHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEE NAIDLFVMGTFETKEVIVTFRHDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL EEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RKGVTSYSSKMTSLF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA