Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170023209

Identifier: 170023209

GI number: 170023209

Start: 1075848

End: 1076168

Strand: Reverse

Name: 170023209

Synonym: YPK_0960

Alternate gene names: NA

Gene position: 1076168-1075848 (Counterclockwise)

Preceding gene: 170023210

Following gene: 170023199

Centisome position: 22.95

GC content: 50.16

Gene sequence:

>321_bases
ATGCCCGGCTATCGTTATCGAATCACTATTGAACCCTTGACTGACCGTAAGGGCGCAGCCATTGATAAAGCCCCTGTCAC
CTTTGAAGCCGAGAATCATGACGAGATCCTCAGCATCATCGAACGGTTACAGGCCCGTGAAGATCTGGGCTTCGGCCAGG
AGAAAACTGCCGCCTTTGCCTTAGGTTTGAAGCTGTTCTCGGAAACCATGATGGAGAATCGTAAGCATCCGCTATTTGAG
CCGCTGCGCGGTGCATTTAAAGACTTTATGATCCTACTGAAGAAAGGTTCACCGCGTGACCGTAGTGATCATGCAGAATA
G

Upstream 100 bases:

>100_bases
ATACGGCGCTACTGGCTGCGGTAGACACCATTGAAGAAGAGTTGCAACCGGTTGGGGTGCAACCTGCGGCAGTTGATGCC
ACTGTACAGGAGAAAAACTG

Downstream 100 bases:

>100_bases
TGATCATGCAGAATAGCCGCTCTTGATAAGAGATCGGCTAAGTTTGGGGTTAAGCCCGTCACTGAGCCGTCAAGAAAACC
ACTGGTTAGCCGCCATCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MPGYRYRITIEPLTDRKGAAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFALGLKLFSETMMENRKHPLFE
PLRGAFKDFMILLKKGSPRDRSDHAE

Sequences:

>Translated_106_residues
MPGYRYRITIEPLTDRKGAAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFALGLKLFSETMMENRKHPLFE
PLRGAFKDFMILLKKGSPRDRSDHAE
>Mature_105_residues
PGYRYRITIEPLTDRKGAAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFALGLKLFSETMMENRKHPLFEP
LRGAFKDFMILLKKGSPRDRSDHAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12135; Mature: 12004

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGYRYRITIEPLTDRKGAAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFA
CCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LGLKLFSETMMENRKHPLFEPLRGAFKDFMILLKKGSPRDRSDHAE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PGYRYRITIEPLTDRKGAAIDKAPVTFEAENHDEILSIIERLQAREDLGFGQEKTAAFA
CCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LGLKLFSETMMENRKHPLFEPLRGAFKDFMILLKKGSPRDRSDHAE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA