| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023205
Identifier: 170023205
GI number: 170023205
Start: 1070946
End: 1073105
Strand: Direct
Name: 170023205
Synonym: YPK_0956
Alternate gene names: NA
Gene position: 1070946-1073105 (Clockwise)
Preceding gene: 170023204
Following gene: 170023206
Centisome position: 22.84
GC content: 46.06
Gene sequence:
>2160_bases ATGGGCATGCTAGGTATGGCGGTACCTCCATCACAGGCTTCTTCTGATAATACTGGCTGTGTGTGGGGAAAATATTGCCC GCTCAGTGGTGTACCCTTTTTGGATGTTTACAATGATACTCGGGTTAATATGATGTTATTGGTTGGAGAACCAAAAAATT TCATATTGCCACGTTTAACGATGCCAGCGGATATTACCCGTAGTAGGAATTACCATTTTGGTGAGTTTTATTATGATGAA ATGAGTTTTCCGAAGCGGGAAAAAAGTCTTACAGATGAGAATAATGATAGCCCTTCGGAAGAAACGCCATTTGATAAGAT GGCAAAGACGCTAGGCATCAATTCGGCTTCGTTTAAGGGAACCAATGCCCGATATAGAGAAGCACGGCATATCTCCAATA ATCCCGCATCAGTTGAGCAATTTTTTACCGCTTTACTGGCAGACTCGTCCTTAACTGCCGATGATCGACATAATTTAGCC CTCTGGCGATCCAATATTTTTCATAATGTCGATGCACCGATCGATGGTGGAATTACACCGCCACCTTTTAACATTGTGCC AGGCTCACATGTTGATGCTTTTAGCGATTATCTTCATGGTGCCAATGCATTTTATCGGGGCGATTACCCAGAGGCCACCG CTTTATTTTCTGCCCTCCAAAAGAGTTCTCAAGCATGGGTCGCAGAAACAGCGACTTATATGTTGTTCCGAGTTGCGCTC AATGAGAGCAGTACAAATGCGTCGGATAAATATGGCATGTTTGAAACTAAAAATATCAATCAGGATGCCGCCCGTCAGGC ATTGGATTATTCTCGGGCCTATTTAGTTGCTTATCCCCAAGGCATTTACGCAGAGTCGATTCAGGGGTTGGAGCGCCGTA TTTACTGGTACCTCTCTGATTGGCAACAACTGGCGCGGCTGTATGAAGAGACATTACTGGCAGCACCGAATGCTGAAGCT TTGTGGGATACCGTATCAGAAGTTGATGCTAAATTTATCAGCAAAGATGCCTTTGGTGGCGAGCCCTTTATCAGCGATAT GCAAGCACCTTTACTGACCTTCACACAAACATTACGTTGGTTGCGATTAGGGGGGCGCCAGAGTGGCTCTGAGTTGGAGG TTACGCAGGAGAAACTGGCAAGTTATAAACCGATGTTTGTCGATGCGGATAGGCTCCCCCTTTGGCAGTATCTACAGACG GCCTGGCTCTATTATCATGAGCAAGATTATGCCGGTGTCGTCGCCACTGTCTCGGCTGTCGACTCTCTGCCAGCCACTGA CATTGTGACCTTCAGTCAACAGATTCTATATGGTGATGCATTGGTGGCTCAACAACAATGGTCACAGGCCGAAGCACATT GGCGCAAGCTGCTGGGCCTGGTGCAATCGCCGCAACAACAGCAATATCTGCAACTCAAACTCGCCGCGGTTCTGGTGAAC AGTGATCAAATTGAGGCCATATTTACCGCAGATAGCCCAATCAAAAACCTGCGTTATCGTTCTCTGATACTCAAAACAAA AGCTCAAAAAGCACTTTTACAACAGCAAGTTATTTCTGGTGCTAATGATGAGGAAAAAACCATTGCTCTGCACACGCTAT TACTGCGGGATCTTATGCTTGGTGATTATCAGGGTTATGAGCAGGATAAACAGTTAAGCCCTCATATTCAGCAATCCGTC GATCAAAAAAGCTTTGCCGATGTAGACCTGGCGGCGTTCGATTGGCAGGGCGATAATGTGGAGCAGGGCTATGCCTGTGC TGCGTTAGATGGGACGGTAAAAGCATTGGTTAAAAATAAAACGGATGGTCATGCCCTCAACTGCTTGGGAGAATTCTTCC GTGTAACTGACATCAATATCAATACTTATCAGGAAGGGGAGGGCAATGAGGTGCTGAATGTCGCAGTCCATGCACATGAA ACAGTGATAACTCAGCCCAATCGTTTCGATTATTATCAACACGTTATCAACGACCCGAAGGCGGAGCCAGAAGATAAAAG CTATGCGCTTTACCGGGCTGTTATGTGCTATGCCCCATCGGGCTATAATCAATGTGGGGGTGAGGATGTCGATATTGCAA CACGTAAGCGTTGGTTTAGCTCATTGAAAACTCAGTATAAAGGTAGCCGATGGGCAGAACGGCTCAACTATTACTGGTAA
Upstream 100 bases:
>100_bases TCTTGTTCTTTTTGCTGAAAATATAAGCGACAATGTCGGATTTCCTGAAGGGTGCCAAGCGAGAATGAAAATAAACAGTA AGTTATGGATGGGCCTCCTA
Downstream 100 bases:
>100_bases GCTGCCTATTAGCGCTATTTATGCCGCCCGCGATGGCAGAGGTTAGCGACAAACTGCAGTTGAGCCATAAGGTGTATGCC CATGATTATCAGGCGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 718
Protein sequence:
>719_residues MGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDE MSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLA LWRSNIFHNVDAPIDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVAL NESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEA LWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQT AWLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVN SDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSV DQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHE TVITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW
Sequences:
>Translated_719_residues MGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDE MSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLA LWRSNIFHNVDAPIDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVAL NESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEA LWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQT AWLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVN SDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSV DQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHE TVITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW >Mature_718_residues GMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDEM SFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLAL WRSNIFHNVDAPIDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALN ESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEAL WDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTA WLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNS DQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVD QKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHET VITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81157; Mature: 81025
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLT CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCC MPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKG CCCHHHCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC TNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPIDGGITP CCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC PPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVAL CCCCCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSD CCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHH WQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRW HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAV HHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCCHHHHHHHH DSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEC SDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLML CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNK CCCCCCCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCC TDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPK CCCHHHHHHHHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCHHHHHHHHHCCCC AEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure GMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLT CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCC MPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKG CCCHHHCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC TNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPIDGGITP CCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC PPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVAL CCCCCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSD CCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHH WQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRW HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAV HHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCCHHHHHHHH DSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEC SDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLML CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNK CCCCCCCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCC TDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPK CCCHHHHHHHHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCHHHHHHHHHCCCC AEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA