| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023190
Identifier: 170023190
GI number: 170023190
Start: 1058243
End: 1059415
Strand: Reverse
Name: 170023190
Synonym: YPK_0941
Alternate gene names: NA
Gene position: 1059415-1058243 (Counterclockwise)
Preceding gene: 170023191
Following gene: 170023189
Centisome position: 22.59
GC content: 51.92
Gene sequence:
>1173_bases ATGCCAATGAATAAGTTATATGAGCTGGCGCATAATTATGCGCGGCGAATCGGTGAAGCCAGCGGGTCAAATATTAATTC CTTGCCGCTTGGCCCTACGGGGATCGGCAAGTTCAGTATCAGCGCCCCGCAGGAAAACGCATTGCGCCTGGCACTGATGG AACAAAACTGGTTTTTACCATTGATTACGAGTCGGGATGTGGCACAAATTCGCGGCCAGGTCATTGATGTGGGTAATCCA GGGGTGTTTACCGGACGTGACCCCGACAAGCGTTTTTCTAAAGATGTGGGGCTGTCGGGCAATATTTACCAGCTGCATCC TACGGATTCATGCGCCCGCTTACCCTGGGAACTGATGTCTGACTGGATCCATTCAGGTACGACTGACGATGAATTTATCG CCTTGGTTGCTGAATTCACACTACGCACGTTCGCTAATGACATGATGCGAGTCGGATTTAACGGCATTAAAGCGGCCGCT AAAACCAGTCTTGAGGCTTATCCAAACGGCGAAGATATCAATATCGGCTGGCATCAGATTGCCAAAAACTTTGACAAACT GCACGCTAACCCGGACACGCCGGAAGAGGACCGCATCCCCGCATTTACCCCGCGCGTCTTAAATCCCGGCGCTGAGACTC TCACGCTGGGCGAAAACGGACAGTTTAAAACGCTGGATGCGTTGGCTTCCTGGGTTATCAGTTCAACTATTCCGCAGCAG TTCCAAAATGAGCCGGATTTAGTCCTGCTTATTGGCTCTGATTTGATTGCCGCTGAACAGTTCCGCTTGTTCCAAGCCGC AGGAAAACCCACTGAAAACATAGCCGCCCAGATGCTCGCTAATACGGTGACCGGTCGCCGGGTTTATGTTGCTCCGTTCT TACCCGGTAAGCGAATTGTCGCGACTACATTAGCTAACTTGCATATCTACACACAGCGCGGGCATCAATACCGCCGTGCG GAACATATCCAGGACCGTCAGGGCTTCGAAAATGCGTGGTGGCGTAATCAGGGCTATGCGCTGGGTCATCCAATGATGTA CGGCGCGGCGGATGAATCTGCAATCAAAATCCTGGCTGAGTCGGACATTACAGCAGCATTAGAAGGCGGCTTGATCCCCG ACGCGTCCGGCGCTGACGACGGCGGTAAATCACTGGATAACACACAGATTTAA
Upstream 100 bases:
>100_bases AAGAGTTACAACTTCTGATTTACGGTTAATTAAACTGGAACAGACAGGATTAAATAGCCATTGCGGTAAACGCACTGACA AATAAACGAGAGCACTCATT
Downstream 100 bases:
>100_bases TTAATTCGAGGCGCGGCATGACATTCAATCCATTACGTTACCGTTCGCAATTATTAGCGCAGGCAACTCAGCGGCGTGAA GTTCGGACCGTATCGGCTGA
Product: P2 family phage major capsid protein
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Phage Gene; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Capsid; Prophage Capsid Protein; Phage-Related Capsid Protein; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Family
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MPMNKLYELAHNYARRIGEASGSNINSLPLGPTGIGKFSISAPQENALRLALMEQNWFLPLITSRDVAQIRGQVIDVGNP GVFTGRDPDKRFSKDVGLSGNIYQLHPTDSCARLPWELMSDWIHSGTTDDEFIALVAEFTLRTFANDMMRVGFNGIKAAA KTSLEAYPNGEDINIGWHQIAKNFDKLHANPDTPEEDRIPAFTPRVLNPGAETLTLGENGQFKTLDALASWVISSTIPQQ FQNEPDLVLLIGSDLIAAEQFRLFQAAGKPTENIAAQMLANTVTGRRVYVAPFLPGKRIVATTLANLHIYTQRGHQYRRA EHIQDRQGFENAWWRNQGYALGHPMMYGAADESAIKILAESDITAALEGGLIPDASGADDGGKSLDNTQI
Sequences:
>Translated_390_residues MPMNKLYELAHNYARRIGEASGSNINSLPLGPTGIGKFSISAPQENALRLALMEQNWFLPLITSRDVAQIRGQVIDVGNP GVFTGRDPDKRFSKDVGLSGNIYQLHPTDSCARLPWELMSDWIHSGTTDDEFIALVAEFTLRTFANDMMRVGFNGIKAAA KTSLEAYPNGEDINIGWHQIAKNFDKLHANPDTPEEDRIPAFTPRVLNPGAETLTLGENGQFKTLDALASWVISSTIPQQ FQNEPDLVLLIGSDLIAAEQFRLFQAAGKPTENIAAQMLANTVTGRRVYVAPFLPGKRIVATTLANLHIYTQRGHQYRRA EHIQDRQGFENAWWRNQGYALGHPMMYGAADESAIKILAESDITAALEGGLIPDASGADDGGKSLDNTQI >Mature_389_residues PMNKLYELAHNYARRIGEASGSNINSLPLGPTGIGKFSISAPQENALRLALMEQNWFLPLITSRDVAQIRGQVIDVGNPG VFTGRDPDKRFSKDVGLSGNIYQLHPTDSCARLPWELMSDWIHSGTTDDEFIALVAEFTLRTFANDMMRVGFNGIKAAAK TSLEAYPNGEDINIGWHQIAKNFDKLHANPDTPEEDRIPAFTPRVLNPGAETLTLGENGQFKTLDALASWVISSTIPQQF QNEPDLVLLIGSDLIAAEQFRLFQAAGKPTENIAAQMLANTVTGRRVYVAPFLPGKRIVATTLANLHIYTQRGHQYRRAE HIQDRQGFENAWWRNQGYALGHPMMYGAADESAIKILAESDITAALEGGLIPDASGADDGGKSLDNTQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42844; Mature: 42713
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMNKLYELAHNYARRIGEASGSNINSLPLGPTGIGKFSISAPQENALRLALMEQNWFLP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCEEE LITSRDVAQIRGQVIDVGNPGVFTGRDPDKRFSKDVGLSGNIYQLHPTDSCARLPWELMS EECCCCHHHHCCEEEECCCCCEECCCCCHHHHHHCCCCCCCEEEECCCCCHHHCCHHHHH DWIHSGTTDDEFIALVAEFTLRTFANDMMRVGFNGIKAAAKTSLEAYPNGEDINIGWHQI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHCCCCCCCCCCCHHHH AKNFDKLHANPDTPEEDRIPAFTPRVLNPGAETLTLGENGQFKTLDALASWVISSTIPQQ HHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHCHHH FQNEPDLVLLIGSDLIAAEQFRLFQAAGKPTENIAAQMLANTVTGRRVYVAPFLPGKRIV HCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHH ATTLANLHIYTQRGHQYRRAEHIQDRQGFENAWWRNQGYALGHPMMYGAADESAIKILAE HHHHHHEEEEECCCCHHHHHHHHHHHCCCCHHCCCCCCEEECCCEEECCCCCCCEEEEEC SDITAALEGGLIPDASGADDGGKSLDNTQI CCCHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PMNKLYELAHNYARRIGEASGSNINSLPLGPTGIGKFSISAPQENALRLALMEQNWFLP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCEEE LITSRDVAQIRGQVIDVGNPGVFTGRDPDKRFSKDVGLSGNIYQLHPTDSCARLPWELMS EECCCCHHHHCCEEEECCCCCEECCCCCHHHHHHCCCCCCCEEEECCCCCHHHCCHHHHH DWIHSGTTDDEFIALVAEFTLRTFANDMMRVGFNGIKAAAKTSLEAYPNGEDINIGWHQI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHCCCCCCCCCCCHHHH AKNFDKLHANPDTPEEDRIPAFTPRVLNPGAETLTLGENGQFKTLDALASWVISSTIPQQ HHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHCHHH FQNEPDLVLLIGSDLIAAEQFRLFQAAGKPTENIAAQMLANTVTGRRVYVAPFLPGKRIV HCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHH ATTLANLHIYTQRGHQYRRAEHIQDRQGFENAWWRNQGYALGHPMMYGAADESAIKILAE HHHHHHEEEEECCCCHHHHHHHHHHHCCCCHHCCCCCCEEECCCEEECCCCCCCEEEEEC SDITAALEGGLIPDASGADDGGKSLDNTQI CCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA