| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023165
Identifier: 170023165
GI number: 170023165
Start: 1034588
End: 1035319
Strand: Direct
Name: 170023165
Synonym: YPK_0916
Alternate gene names: NA
Gene position: 1034588-1035319 (Clockwise)
Preceding gene: 170023164
Following gene: 170023166
Centisome position: 22.06
GC content: 59.43
Gene sequence:
>732_bases ATGTGGCGTAAAGCAACATTATCGATCCCCGGCAACATGGCTGCAGTCAATTGCGCCATGCTGCCGGTGCATCCGTGGCT TTATGGCGTGGGCCGTAGTGAGGGATCGGGCAGTTATCTGAGTCCGCAGAACGCCGTGGATCATCTGGCGGGAAAGTTGG CGGGCAGCGGTGGCCAGCCGCGCGTGGTGGTGTTTATGGTCTGCGCCACTGACCACCCGGCCTTTATGCAGGTACTTACC CAATTTTCTGCGGTGCTGCCCTTACCTGTATTCTCGCAAGTGGCCCGCATGGCCAGCACGGCGGTAACGCTGGCCACCAC CAAAATGCAGTTACCGGCCAATGCCGGAAGCGGATTGCCGCTGCCGCAGTTGTTATCCACCGCAACCAGTCGCATGGCCA TTAATGCCCAACGTATTGCACAGGCCAAAGATGCCGCTGGGGCGGGGGCTAATCTGGCGGGGCTGGCGTCGGCATTGTCC GGTTTTGCCCGTGCCAAAGCGGCGGCACTGGCCAGCATGGAAAGTGCATTAGATGGCCTACTGGCAGGCCGTGCGCAGGC ATGGGTATTTACCGCCAGCGGCAGCGCGGCCACGGTGGCCAGCGAGATGAAAAAGAACGTACCGCAGCAGGATGCTGTTT TTACTCTGGCCACCTTATTTGCCGGAGAGGATTTAACCACGCTGGAGGCGATGATCCATGACACAGATAGTTATGCTGGC ACTGGACGGTGA
Upstream 100 bases:
>100_bases AAAGAAATATCTGAACTCGCGGCCTGGAAGAAATACCGCGTTGCACTTATGCGTATTGATATATCGAAAGCGCCCGACAT CAACTGGCCAGAATCCCCCA
Downstream 100 bases:
>100_bases AGCCATTCCGTTAAAGGGGCTGACCGTGACCCCAACAATGCAATTTCAGGAAAAAGACCAATCCGGCCAGACTTCGAGTA CCGCCACGGCAGAGCAGGGC
Product: putative phage gene
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MWRKATLSIPGNMAAVNCAMLPVHPWLYGVGRSEGSGSYLSPQNAVDHLAGKLAGSGGQPRVVVFMVCATDHPAFMQVLT QFSAVLPLPVFSQVARMASTAVTLATTKMQLPANAGSGLPLPQLLSTATSRMAINAQRIAQAKDAAGAGANLAGLASALS GFARAKAAALASMESALDGLLAGRAQAWVFTASGSAATVASEMKKNVPQQDAVFTLATLFAGEDLTTLEAMIHDTDSYAG TGR
Sequences:
>Translated_243_residues MWRKATLSIPGNMAAVNCAMLPVHPWLYGVGRSEGSGSYLSPQNAVDHLAGKLAGSGGQPRVVVFMVCATDHPAFMQVLT QFSAVLPLPVFSQVARMASTAVTLATTKMQLPANAGSGLPLPQLLSTATSRMAINAQRIAQAKDAAGAGANLAGLASALS GFARAKAAALASMESALDGLLAGRAQAWVFTASGSAATVASEMKKNVPQQDAVFTLATLFAGEDLTTLEAMIHDTDSYAG TGR >Mature_243_residues MWRKATLSIPGNMAAVNCAMLPVHPWLYGVGRSEGSGSYLSPQNAVDHLAGKLAGSGGQPRVVVFMVCATDHPAFMQVLT QFSAVLPLPVFSQVARMASTAVTLATTKMQLPANAGSGLPLPQLLSTATSRMAINAQRIAQAKDAAGAGANLAGLASALS GFARAKAAALASMESALDGLLAGRAQAWVFTASGSAATVASEMKKNVPQQDAVFTLATLFAGEDLTTLEAMIHDTDSYAG TGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24892; Mature: 24892
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRKATLSIPGNMAAVNCAMLPVHPWLYGVGRSEGSGSYLSPQNAVDHLAGKLAGSGGQP CCCEEEEECCCCEEEEEEEEEECCHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC RVVVFMVCATDHPAFMQVLTQFSAVLPLPVFSQVARMASTAVTLATTKMQLPANAGSGLP EEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCC LPQLLSTATSRMAINAQRIAQAKDAAGAGANLAGLASALSGFARAKAAALASMESALDGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGRAQAWVFTASGSAATVASEMKKNVPQQDAVFTLATLFAGEDLTTLEAMIHDTDSYAG HHCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC TGR CCC >Mature Secondary Structure MWRKATLSIPGNMAAVNCAMLPVHPWLYGVGRSEGSGSYLSPQNAVDHLAGKLAGSGGQP CCCEEEEECCCCEEEEEEEEEECCHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC RVVVFMVCATDHPAFMQVLTQFSAVLPLPVFSQVARMASTAVTLATTKMQLPANAGSGLP EEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCC LPQLLSTATSRMAINAQRIAQAKDAAGAGANLAGLASALSGFARAKAAALASMESALDGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGRAQAWVFTASGSAATVASEMKKNVPQQDAVFTLATLFAGEDLTTLEAMIHDTDSYAG HHCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC TGR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA