| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023123
Identifier: 170023123
GI number: 170023123
Start: 1001884
End: 1002381
Strand: Direct
Name: 170023123
Synonym: YPK_0874
Alternate gene names: NA
Gene position: 1001884-1002381 (Clockwise)
Preceding gene: 170023122
Following gene: 170023125
Centisome position: 21.36
GC content: 45.18
Gene sequence:
>498_bases ATGATTATGCGTTTATCCAAAGCGCTGATGGTGTGTGCTATTGCGCTTTTTGCCACGCTGGTTGTTTTCGGTAATATGAC TGACTACAACACCAACTTCGTTTTTGTTCATCATGTCTTACAGATGGACACTATTTTCCCTGATGCCACCATTAGCTATC GTGCGATCCACTCGCCGTGGCTACAACAACTGGGTTATATCGGCATTATCCTGCTCGAAACACTGACAGCGGTATTTTGC TGGGTTGGTGGCATAGGTTTGCTGATAAATAGGAAAGCGCCAGCAAAAGTCTTTAACCGGAAAAAGGGTATTGCGATTAT CGGCCTGACTCTGGGTTTCCTGACCTGGCAGGTGGTTTTTATGTCGATAGGGGGAGAATGGTTTGGTATGTGGATGTCAA AGCAATGGAATGGCGTTCCTAATGCTTTCCGCTTCTTTGTCACCACCATTCTGGTACTGATTTATTTGGTACAGCCTGAT GGCGAGTTAGATGAATAA
Upstream 100 bases:
>100_bases TGTTTACTGCTGGTGGGTATCGGTTAAGCCACTGTTTTGTTTCTGAACTCACTCGCGCGCCAACCAAGTGCTTGTGTCAT GTTCAGGAGTGACTCTATCG
Downstream 100 bases:
>100_bases CCCACCCATCTATTTGATATAAAACAAAATACAGAGACCGGTTAACCGGTCTCTGTAGAGTAGAACTCTTTATTATTTAT CTTCGGCGAGTGAGTAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDATISYRAIHSPWLQQLGYIGIILLETLTAVFC WVGGIGLLINRKAPAKVFNRKKGIAIIGLTLGFLTWQVVFMSIGGEWFGMWMSKQWNGVPNAFRFFVTTILVLIYLVQPD GELDE
Sequences:
>Translated_165_residues MIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDATISYRAIHSPWLQQLGYIGIILLETLTAVFC WVGGIGLLINRKAPAKVFNRKKGIAIIGLTLGFLTWQVVFMSIGGEWFGMWMSKQWNGVPNAFRFFVTTILVLIYLVQPD GELDE >Mature_165_residues MIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDATISYRAIHSPWLQQLGYIGIILLETLTAVFC WVGGIGLLINRKAPAKVFNRKKGIAIIGLTLGFLTWQVVFMSIGGEWFGMWMSKQWNGVPNAFRFFVTTILVLIYLVQPD GELDE
Specific function: Unknown
COG id: COG5472
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18640; Mature: 18640
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDATISYRAIHSPW CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHH LQQLGYIGIILLETLTAVFCWVGGIGLLINRKAPAKVFNRKKGIAIIGLTLGFLTWQVVF HHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHCCCCEEEEHHHHHHHHHHHHH MSIGGEWFGMWMSKQWNGVPNAFRFFVTTILVLIYLVQPDGELDE HHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDATISYRAIHSPW CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHH LQQLGYIGIILLETLTAVFCWVGGIGLLINRKAPAKVFNRKKGIAIIGLTLGFLTWQVVF HHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHCCCCEEEEHHHHHHHHHHHHH MSIGGEWFGMWMSKQWNGVPNAFRFFVTTILVLIYLVQPDGELDE HHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA