| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is mltC [H]
Identifier: 170023067
GI number: 170023067
Start: 934906
End: 935994
Strand: Reverse
Name: mltC [H]
Synonym: YPK_0818
Alternate gene names: 170023067
Gene position: 935994-934906 (Counterclockwise)
Preceding gene: 170023068
Following gene: 170023066
Centisome position: 19.96
GC content: 46.19
Gene sequence:
>1089_bases ATGGCTTGTAAGATGAAGAAAATTTTAGCTTTGCTGGTAATCGCCCCCTTATTAGTGTCTTGTTCGGGCAACAAAAATCA GGTTGAAAACGAAGTTTTTGTCAAAGACACCAATGGTTTTGAGATTTTAATGGGCCAATTTGCCCATAACATTGAAAATA TTTGGGGCTTAAAAGAAGTCTTAATCGCTGGTCCAAAAGATTACGTTAAGTACACGGATCAATATCAAACCCGCAGCCAT ATCAATTTTGATGCTGGTACCATTACGATAGAGACGATCGCCACGACCAATCCGGCGGCACATTTACGTCAGGCGATCAT CACAACGCTACTGATGGGTGATGATCCAGGCTCGATCGACCTCTATTCTGATGTAAACGATATTCAGATCAGTAAAGAGC CGTTCCTCTATGGCCAGGTGCTGGACAACAATGGCGAACCAATCCGTTGGGAATGGCGGGCAGCCCATTTTGCTGATTAT TTGCTACAAAACAAAATGCAAACACGGACTTCCGGTTTGCATGTGATCTCGTTCGTTACCATACAGTTAGTGCCAAACCA TCTGGACAAACGGGCGCATAAATACCTGCCATTGGTACGGAAATCAGCAGCACGTTACGGCGTGGAAGAGTCTTTGATTC TCGCCATTATGCAAACCGAATCGAGCTTCAACCCCTATGCCGTCAGCCGTTCTGATGCGCTCGGTCTGATGCAGGTGGTT CAACATACTGCAGGAAAAGATGTATTCAAACTGAAAGGCAAAAGTGGCCAACCAAGCCGCAGCTATCTGTTTGATCCTGA AAATAATATCGACGCAGGCACCGCATATTTATCTATTCTGCAAAATACCTATTTGGGGGGGATTCAAAATGCCACCTCAC GGCGTTATGCCGTGATCACCTCCTACAACGGCGGCGCAGGTAGCGTATTGCGCGTGTTCCACAGCGATAAAAATAAGGCA GTGGGTATCATTAACACGATGTCACCAGGGGATGTGTTCCAAACACTCACGACCAAGCATCCATCAGGTGAATCCCGCCG TTATCTGGTGAAAGTGAACAGCGCACAGAAGAACTATCGCCGCTATTAG
Upstream 100 bases:
>100_bases GTAAATCCCCAGGAGCTTACATCAGTAAGTGACTGGGGTGAGCGAAGGCAGCCAACGCACTGGTAGCTTGAAATATGACG GGTAAATTCCTCATCAAGAT
Downstream 100 bases:
>100_bases TGGTTAATAAGTAAATAGTGGTTAATAAGTAAATAGTGGTTAATAAGTAAATAGTGGTTAATAGGCAAATAGTGGTTAGC AGGCAAATAATGGTTAGCAA
Product: murein transglycosylase C
Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]
Alternate protein names: Murein hydrolase C [H]
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MACKMKKILALLVIAPLLVSCSGNKNQVENEVFVKDTNGFEILMGQFAHNIENIWGLKEVLIAGPKDYVKYTDQYQTRSH INFDAGTITIETIATTNPAAHLRQAIITTLLMGDDPGSIDLYSDVNDIQISKEPFLYGQVLDNNGEPIRWEWRAAHFADY LLQNKMQTRTSGLHVISFVTIQLVPNHLDKRAHKYLPLVRKSAARYGVEESLILAIMQTESSFNPYAVSRSDALGLMQVV QHTAGKDVFKLKGKSGQPSRSYLFDPENNIDAGTAYLSILQNTYLGGIQNATSRRYAVITSYNGGAGSVLRVFHSDKNKA VGIINTMSPGDVFQTLTTKHPSGESRRYLVKVNSAQKNYRRY
Sequences:
>Translated_362_residues MACKMKKILALLVIAPLLVSCSGNKNQVENEVFVKDTNGFEILMGQFAHNIENIWGLKEVLIAGPKDYVKYTDQYQTRSH INFDAGTITIETIATTNPAAHLRQAIITTLLMGDDPGSIDLYSDVNDIQISKEPFLYGQVLDNNGEPIRWEWRAAHFADY LLQNKMQTRTSGLHVISFVTIQLVPNHLDKRAHKYLPLVRKSAARYGVEESLILAIMQTESSFNPYAVSRSDALGLMQVV QHTAGKDVFKLKGKSGQPSRSYLFDPENNIDAGTAYLSILQNTYLGGIQNATSRRYAVITSYNGGAGSVLRVFHSDKNKA VGIINTMSPGDVFQTLTTKHPSGESRRYLVKVNSAQKNYRRY >Mature_361_residues ACKMKKILALLVIAPLLVSCSGNKNQVENEVFVKDTNGFEILMGQFAHNIENIWGLKEVLIAGPKDYVKYTDQYQTRSHI NFDAGTITIETIATTNPAAHLRQAIITTLLMGDDPGSIDLYSDVNDIQISKEPFLYGQVLDNNGEPIRWEWRAAHFADYL LQNKMQTRTSGLHVISFVTIQLVPNHLDKRAHKYLPLVRKSAARYGVEESLILAIMQTESSFNPYAVSRSDALGLMQVVQ HTAGKDVFKLKGKSGQPSRSYLFDPENNIDAGTAYLSILQNTYLGGIQNATSRRYAVITSYNGGAGSVLRVFHSDKNKAV GIINTMSPGDVFQTLTTKHPSGESRRYLVKVNSAQKNYRRY
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI87082191, Length=358, Percent_Identity=77.6536312849162, Blast_Score=569, Evalue=1e-163, Organism=Escherichia coli, GI87081855, Length=166, Percent_Identity=41.566265060241, Blast_Score=145, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 - InterPro: IPR000189 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 40382; Mature: 40250
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00922 TRANSGLYCOSYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACKMKKILALLVIAPLLVSCSGNKNQVENEVFVKDTNGFEILMGQFAHNIENIWGLKEV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCHHHH LIAGPKDYVKYTDQYQTRSHINFDAGTITIETIATTNPAAHLRQAIITTLLMGDDPGSID HHCCCHHHHHHCCCCCCCCCCEECCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEE LYSDVNDIQISKEPFLYGQVLDNNGEPIRWEWRAAHFADYLLQNKMQTRTSGLHVISFVT EECCCCCEEECCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEEE IQLVPNHLDKRAHKYLPLVRKSAARYGVEESLILAIMQTESSFNPYAVSRSDALGLMQVV EEECHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCEEECCCHHHHHHHHH QHTAGKDVFKLKGKSGQPSRSYLFDPENNIDAGTAYLSILQNTYLGGIQNATSRRYAVIT HHHCCCCEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE SYNGGAGSVLRVFHSDKNKAVGIINTMSPGDVFQTLTTKHPSGESRRYLVKVNSAQKNYR ECCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHC RY CC >Mature Secondary Structure ACKMKKILALLVIAPLLVSCSGNKNQVENEVFVKDTNGFEILMGQFAHNIENIWGLKEV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCHHHH LIAGPKDYVKYTDQYQTRSHINFDAGTITIETIATTNPAAHLRQAIITTLLMGDDPGSID HHCCCHHHHHHCCCCCCCCCCEECCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEE LYSDVNDIQISKEPFLYGQVLDNNGEPIRWEWRAAHFADYLLQNKMQTRTSGLHVISFVT EECCCCCEEECCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEEE IQLVPNHLDKRAHKYLPLVRKSAARYGVEESLILAIMQTESSFNPYAVSRSDALGLMQVV EEECHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCEEECCCHHHHHHHHH QHTAGKDVFKLKGKSGQPSRSYLFDPENNIDAGTAYLSILQNTYLGGIQNATSRRYAVIT HHHCCCCEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE SYNGGAGSVLRVFHSDKNKAVGIINTMSPGDVFQTLTTKHPSGESRRYLVKVNSAQKNYR ECCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHC RY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA