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The map label for this gene is 170023058

Identifier: 170023058

GI number: 170023058

Start: 922895

End: 923407

Strand: Direct

Name: 170023058

Synonym: YPK_0809

Alternate gene names: NA

Gene position: 922895-923407 (Clockwise)

Preceding gene: 170023057

Following gene: 170023059

Centisome position: 19.68

GC content: 52.63

Gene sequence:

>513_bases
ATGCAACCGGCTATCAGCCTGTTGAAAAGTGCACAGGAACAGATGGAGGCCATCTCCGCAGATGCACAAACCGCCACCGC
CAGTCCGGCCGACCTGCAGGCACAAATCAGTCTGTTGCAGCAAAACCTCACTTTACTGAGTGCGCCAAAGGGGATCGCGT
TGAGCAGCGGGGAGCATCTGCAAATGAGTGCCAGCGATAACCTGATTGCCACCGCCGGTAAAAATGCCGACGTCAGCGTC
GCGAAAAACTTCTTTATCGGCGTAGGCAATACCCTAAGTATCTTCGTCAGAAAGCTGGGGATGAAACTAATAGCCAATCA
GGGGTCGATAACAGTCCAGGCGCAGAATGATCTGATGGAGTTATTGGCGCGCAAAGCGATCACGATCACCAGCACCGAGG
ATGAGATAAAAATCACCGCCAAGAAGAGGATCACGCTGAATGCGGGAGGCAGCTATATCACACTGGATGAGAATCGAATC
GGATCGAGTCAGGAACGGCGGGGGAATATTTGA

Upstream 100 bases:

>100_bases
TTGGAAGAGGTTAGAGATGGAGAAGTATAGAGTTTGGAGATAATTTGTAAAATTAACAGCTAAATTAAAAAATATCTTAC
TTAAATATAAGGTACTGGAG

Downstream 100 bases:

>100_bases
CCAAAGCGGGGTATTACGGGCGGTTAGATAAGGCCAAGCTCCCAACTGAATTTCCAGCCTTAGCCGCTAAAGCTAAACCA
CCCACTCAGAAGTATCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Element Vgr Family Protein; VGR-Related Protein; Vgr-Related Protein; VGR-Like Protein; Type VI Secretion System Rhs Element Vgr Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Vgr Related Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTLLSAPKGIALSSGEHLQMSASDNLIATAGKNADVSV
AKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQAQNDLMELLARKAITITSTEDEIKITAKKRITLNAGGSYITLDENRI
GSSQERRGNI

Sequences:

>Translated_170_residues
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTLLSAPKGIALSSGEHLQMSASDNLIATAGKNADVSV
AKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQAQNDLMELLARKAITITSTEDEIKITAKKRITLNAGGSYITLDENRI
GSSQERRGNI
>Mature_170_residues
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTLLSAPKGIALSSGEHLQMSASDNLIATAGKNADVSV
AKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQAQNDLMELLARKAITITSTEDEIKITAKKRITLNAGGSYITLDENRI
GSSQERRGNI

Specific function: Unknown

COG id: COG4253

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18026; Mature: 18026

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTLLSAPKGIALSSGEHL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCEECCCCEE
QMSASDNLIATAGKNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQAQNDLME
EEECCCCEEEECCCCCCCEEECEEEEECCCHHHHHHHHHHHHHEECCCCEEEEEHHHHHH
LLARKAITITSTEDEIKITAKKRITLNAGGSYITLDENRIGSSQERRGNI
HHHHCEEEEECCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCHHHCCCC
>Mature Secondary Structure
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTLLSAPKGIALSSGEHL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCEECCCCEE
QMSASDNLIATAGKNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQAQNDLME
EEECCCCEEEECCCCCCCEEECEEEEECCCHHHHHHHHHHHHHEECCCCEEEEEHHHHHH
LLARKAITITSTEDEIKITAKKRITLNAGGSYITLDENRIGSSQERRGNI
HHHHCEEEEECCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA