| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023029
Identifier: 170023029
GI number: 170023029
Start: 884731
End: 885804
Strand: Direct
Name: 170023029
Synonym: YPK_0780
Alternate gene names: NA
Gene position: 884731-885804 (Clockwise)
Preceding gene: 170023026
Following gene: 170023030
Centisome position: 18.87
GC content: 46.46
Gene sequence:
>1074_bases ATGAGCAAATGGTCTGAAGAAAAGTCATGGGAATGGCATAAACAGCAGGGGTGGTTGCGTGGTTTTAACTATTTACCGCG TACCGCCGTCAACTGGACTGAAATGTGGCAACAGGATACGTTCGATCCGGCTTGTATGACTCAAGAGCTGCAATGGGCTG CTGAGGCAGGGTACAACACACTGCGGACCAATTTGCCCTTTGTTGTCTGGCAGCATGATCCTGATGGATTAATGACTAGA GTTGAGCATTTTCTCGATATTTGCCAACGTGTTGGCATCAAAGTGATGTTAACGCTAATGGATGATTGTGGCTTTTCTGG TGACCATCCTTTTATCGGGCAACAAAAACAACCTATTCCCGGTTTGCATAATAGTCAGGCTGCCGCCAGCCCTGGTCGCA ATGTGGTCATGCAGCCTTATTTATGGGGACAGGTTGAACGGTATCTCAAAGAGATTATTGGTCATTTCGCTCACGATGAA CGGATCGTGATATGGGATCTCTACAACGAGCCAACCAACCGTATGATTTTCACCTTAGCGGGTGAAGACGCGTTTGATCC GGCGCTGGAAGAATATAGCCACCAGTTAATGGAAAAAGCGTTTATGTGGGCACGGGAGGTCAACCCGACACAGCCACTCA CAGTGGGCGCGTGGCATATTGCTAATATTCTGGATCTCGGTGCACCTATTTATCAGCATCCGACGGATATACGTGCCTTG GAATTATCGGATATCATCTCCTTCCATGCCTATGTACCATTAGATTTAATGAACAAAGCGATTGGCCTTTTGAAAGAATA TAAGCGCCCAATGCTGTGTACCGAATGGTTGGCCCGTCATGCCGAATCGAAAATGCATGAACAGTTACCTTTGTTTAACG CTGAAGGTATTGGTTGCTACCAATGGGGGTTAGTCAAAGGCGCGACTCAAACTCATATTCCATGGCCTGAAATTAAACGT ACCGATAATGACTATGCGTCCCGCTGGTTCCATGATGTTTTTAATGAGGAGGGTACCGCTTATGACCCCTCTGAAATGGA ACTGCTAAAGGCGTTAGCTCTGAAAAATACATAA
Upstream 100 bases:
>100_bases TTTTGTGATGAGAGTCACTTTTGATGCGATGACTGTTTGATATTAGTTTATTAGCTAATATATTAGCTAGGATGTGGCTA CTTATTAGATGAGAATAATT
Downstream 100 bases:
>100_bases ATATAGCCTGCTCTGCCATAGCAACCTCAGTGACATATCGGGCTGTGGCGGGCATTAAAAATTTATCTGTACCTTACATA ATATATACCCAAGTGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTR VEHFLDICQRVGIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDE RIVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRAL ELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKR TDNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT
Sequences:
>Translated_357_residues MSKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTR VEHFLDICQRVGIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDE RIVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRAL ELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKR TDNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT >Mature_356_residues SKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTRV EHFLDICQRVGIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDER IVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRALE LSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKRT DNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41432; Mature: 41300
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNT CCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHH LRTNLPFVVWQHDPDGLMTRVEHFLDICQRVGIKVMLTLMDDCGFSGDHPFIGQQKQPIP HHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC GLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIWDLYNEPTNRMIFTLA CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEC GEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRAL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCHHCCCCCCHHH ELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCY HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE QWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT HHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNT CCCCCCCCCHHHHHCCHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHH LRTNLPFVVWQHDPDGLMTRVEHFLDICQRVGIKVMLTLMDDCGFSGDHPFIGQQKQPIP HHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC GLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIWDLYNEPTNRMIFTLA CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEC GEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRAL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCHHCCCCCCHHH ELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCY HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE QWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT HHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA