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The map label for this gene is rhsC [H]

Identifier: 170023021

GI number: 170023021

Start: 877295

End: 878278

Strand: Direct

Name: rhsC [H]

Synonym: YPK_0772

Alternate gene names: 170023021

Gene position: 877295-878278 (Clockwise)

Preceding gene: 170023020

Following gene: 170023022

Centisome position: 18.71

GC content: 49.29

Gene sequence:

>984_bases
ATGCCAGAACCATCCGCTGTGAATATGATCGGGAAGATAATCTACTTTCAACGGCCGACCAAACTGCTTGATGGGCTGCG
GGTGATCGACAAAGAGACCCCCTCGCGCGGTGAACCGGTGTGGCAGGATGAAACCTGGTTTATGTGGGACGGTGACGTGA
TGGTGGGCGAGTTGCAGCGTGAAGTTGCTCCCCGGGTGGTGACGCCTGAAACCTGGGACAAACCGGATGGTATCGTCTAC
AGCGGCCAGTTTTACGTGTATCAGCCAGATAGCTTCGAACCCCGCGCCATGCAGCGTTATCAACAGATTGCGGAAGCTGA
AGACGGCGAAATCGCGCCATTAGGCGAAGAGCAGATTTATTTCTACCAGAATGACCCGAACGGTATGCCGATCCGCCTGC
AGGATGGCGAAGGCGAAGTGGTATGGGAAGCACAGTTCACCCCGTTCGGGCAACTGAGTGTCACGGGTACCAGCCAACTG
CGCCAGCCGCTGCGCATGCAGGGCCAATATTACGACACGGAAAGCGGTTTACATTATAACCGCTACCGTTATTATGATCC
GGCCTGCGGTGTGTTTATCAGCCAGGACCCAATAGGGTTAAAAGGCGGATTAAATCCTTACCAGTTTGCAGTGAATACGC
TGGGATGGGTGGATCCGCTGGGGTTGACAGGTATTATTTATTTAAGAACGGATCGTAGATCTGGTCGAGAATATATAGGT
AAATCAAAGAATCAACAAACTTATGAAAAACGTAAAAAGGCACATGATAGAAAAGCAAAGAAAAATGATCCGACACATCA
AGGATATAATTTTGTCGAATTAGAGCAATCTATAGTAGGGGCCGATCCGCTAGCAAAAGCTGAAGAAGATTGGATTCGTG
CAGGTGAGGGGCCAACTGGAGTTAATGGAGCAGGATTGGAAAATGAACGTCATGAAATGAATGATGATCGCTATGCTAAC
AATGGGGGATGCATGAAAAAATGA

Upstream 100 bases:

>100_bases
TGTAATTACCCGCCGATATATTAAAGGTGATCGTTTAGGCGGTCACTGAACTTATCTTGTACCACCATGCGGCTTCCGAT
AGCGGGATGTACGCTGCCCG

Downstream 100 bases:

>100_bases
TTAAGAAAAAGAAAAAAAACAATCCAATATTATATAATTTATATGCAATTCCTTTGGTTGATGGTTCTTGGACGTTAGGG
CATATATGCTATCTCGTAGA

Product: RHS protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MPEPSAVNMIGKIIYFQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVGELQREVAPRVVTPETWDKPDGIVY
SGQFYVYQPDSFEPRAMQRYQQIAEAEDGEIAPLGEEQIYFYQNDPNGMPIRLQDGEGEVVWEAQFTPFGQLSVTGTSQL
RQPLRMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIGLKGGLNPYQFAVNTLGWVDPLGLTGIIYLRTDRRSGREYIG
KSKNQQTYEKRKKAHDRKAKKNDPTHQGYNFVELEQSIVGADPLAKAEEDWIRAGEGPTGVNGAGLENERHEMNDDRYAN
NGGCMKK

Sequences:

>Translated_327_residues
MPEPSAVNMIGKIIYFQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVGELQREVAPRVVTPETWDKPDGIVY
SGQFYVYQPDSFEPRAMQRYQQIAEAEDGEIAPLGEEQIYFYQNDPNGMPIRLQDGEGEVVWEAQFTPFGQLSVTGTSQL
RQPLRMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIGLKGGLNPYQFAVNTLGWVDPLGLTGIIYLRTDRRSGREYIG
KSKNQQTYEKRKKAHDRKAKKNDPTHQGYNFVELEQSIVGADPLAKAEEDWIRAGEGPTGVNGAGLENERHEMNDDRYAN
NGGCMKK
>Mature_326_residues
PEPSAVNMIGKIIYFQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVGELQREVAPRVVTPETWDKPDGIVYS
GQFYVYQPDSFEPRAMQRYQQIAEAEDGEIAPLGEEQIYFYQNDPNGMPIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLR
QPLRMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIGLKGGLNPYQFAVNTLGWVDPLGLTGIIYLRTDRRSGREYIGK
SKNQQTYEKRKKAHDRKAKKNDPTHQGYNFVELEQSIVGADPLAKAEEDWIRAGEGPTGVNGAGLENERHEMNDDRYANN
GGCMKK

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786917, Length=106, Percent_Identity=49.0566037735849, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI48994942, Length=107, Percent_Identity=47.6635514018692, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1790020, Length=106, Percent_Identity=49.0566037735849, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786706, Length=123, Percent_Identity=42.2764227642276, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 37326; Mature: 37195

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPSAVNMIGKIIYFQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVGELQR
CCCCHHHHHHHHHEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEHHHHH
EVAPRVVTPETWDKPDGIVYSGQFYVYQPDSFEPRAMQRYQQIAEAEDGEIAPLGEEQIY
HHCCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
FYQNDPNGMPIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLRQPLRMQGQYYDTESGLHYN
EEECCCCCCEEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCEECCCCCCEEC
RYRYYDPACGVFISQDPIGLKGGLNPYQFAVNTLGWVDPLGLTGIIYLRTDRRSGREYIG
CEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHC
KSKNQQTYEKRKKAHDRKAKKNDPTHQGYNFVELEQSIVGADPLAKAEEDWIRAGEGPTG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCHHCCHHHHHCCCCCCC
VNGAGLENERHEMNDDRYANNGGCMKK
CCCCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PEPSAVNMIGKIIYFQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVGELQR
CCCHHHHHHHHHEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEHHHHH
EVAPRVVTPETWDKPDGIVYSGQFYVYQPDSFEPRAMQRYQQIAEAEDGEIAPLGEEQIY
HHCCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
FYQNDPNGMPIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLRQPLRMQGQYYDTESGLHYN
EEECCCCCCEEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCEECCCCCCEEC
RYRYYDPACGVFISQDPIGLKGGLNPYQFAVNTLGWVDPLGLTGIIYLRTDRRSGREYIG
CEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHC
KSKNQQTYEKRKKAHDRKAKKNDPTHQGYNFVELEQSIVGADPLAKAEEDWIRAGEGPTG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCHHCCHHHHHCCCCCCC
VNGAGLENERHEMNDDRYANNGGCMKK
CCCCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503; 2644231; 2403547; 7934896 [H]