| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023014
Identifier: 170023014
GI number: 170023014
Start: 867069
End: 868388
Strand: Direct
Name: 170023014
Synonym: YPK_0765
Alternate gene names: NA
Gene position: 867069-868388 (Clockwise)
Preceding gene: 170023013
Following gene: 170023015
Centisome position: 18.49
GC content: 46.29
Gene sequence:
>1320_bases ATGGAAACCCCAGGGGTAAGTAATCCTATTGAGCGTCGTTTTATGCAGGCGCATGATGACTGGTTAACGTTTGCCGGCAA TAAAAAAGCGAAATTATTATTATGGCAAGCGAATGAAGCCGATGAACCTTTGCTTAAAACCTATTTTCAGGTGCAGGAAG AGAATGCCTGTGCGGTTATTCAATTTGATGATGTTTTTGAAACGGCAGAGCAATTTACTGATGCGATAATAAAGCACATT ATTCATTTTTATCATCAACGGCGTGAGGGGTCTGCGGCGGCGGGAATTACTGCCGATTGGCACCCCCCTGAACTTACCTC ACCGGGTTCTCATCAGGTGCTATTTACTATCGCGAAAAGCCTTATTCAGCATCATCCCGATGTTTTCCCAGGATTTGTTT GGGTATTCAGACCCAATATTGTTGTTTCCGAACCGCGCTTTACTGAATGGCTTTTAACATTAACCGCGGATCTCTGTCTT GACCCCTGGCTTGCCGAGCGCCTGCGTTTGGTTCTTTACGGTGAGCTTTCAGACGGTATTCAATCCTTATCACAGGCTGC GCCTGAAAATATTCAGTTGATTAACGGCGTATATCATATGGCCGGTGCGCCGGGTGAAATGGTTGAGGAATCCACGGAGC GGGGGCCGGGTGCTGATTTTCGTCGTTTATTTATTGCCCTAACAGAAACAATCCCATTGAATGACCCTTCGCGTCTGGCG CGCTTACAAAAGCAGGCGTTGAATATTTCACAAAAAGAGGGCTGGTTCGATCAAAGCGTAGTGATTTATTTATTAGTGGG AGCCGCACAATTAAAATGGCAGGATTTCCCACGAGCATTAAGCGCTTATCAATCAGCGGCGCAAGAAGGCGAGAATGCCA TAATAGCGGACCATCCTGCGGGCAATAAGTTGGTTGCGAATGCATTATTTGGTGAAGCCAGTGTTTATTTCAGCCAAAAA GAATATGCCATGGCAGCACAATGCTATGAAAGTATTGCGCCTTATACCGAGGCGGCGGCTGATGCGGTATTAACGATTGA AACCTGGCGTATGAGTGCTTATTGCTGGTGGGAAGATAATTATTTTACGCTGGCCTGGAATGCCGGATTGAATGCATTGA AAATCGGCTTACCGCTGGACGACGATATAAAAACTAACAGTAGCCTTGGCGTCGCGGCTTATTGGATGCATCAACATTAT GGGCGCTGGGAGAATTATGACGATGAGCTGCGCACTGTTCTTTCTGCGCTATACGGTGATGAATGGCTGGATATTATCAC GCCGCTTGATCAAAGAAATATAACGTTAGCCGCAGGCTAA
Upstream 100 bases:
>100_bases AAAGCTAAAACAGTGACATCCTGCGGTGATACGGAAAATATCGTGGAAGGTGGCATTCTAAAATTAAATCCTTAACGTAT TGTCAGGAAGGATATTTGGT
Downstream 100 bases:
>100_bases TCAGGGAGCGATAATGGCAATGCCAGCGGTAAAACATTTTGATCCGGTCATTGGGCTGGATGTCCATACGGTCATTATTC CTCCCTCACCGGTCCCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues METPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQEENACAVIQFDDVFETAEQFTDAIIKHI IHFYHQRREGSAAAGITADWHPPELTSPGSHQVLFTIAKSLIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLTLTADLCL DPWLAERLRLVLYGELSDGIQSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPLNDPSRLA RLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENAIIADHPAGNKLVANALFGEASVYFSQK EYAMAAQCYESIAPYTEAAADAVLTIETWRMSAYCWWEDNYFTLAWNAGLNALKIGLPLDDDIKTNSSLGVAAYWMHQHY GRWENYDDELRTVLSALYGDEWLDIITPLDQRNITLAAG
Sequences:
>Translated_439_residues METPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQEENACAVIQFDDVFETAEQFTDAIIKHI IHFYHQRREGSAAAGITADWHPPELTSPGSHQVLFTIAKSLIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLTLTADLCL DPWLAERLRLVLYGELSDGIQSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPLNDPSRLA RLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENAIIADHPAGNKLVANALFGEASVYFSQK EYAMAAQCYESIAPYTEAAADAVLTIETWRMSAYCWWEDNYFTLAWNAGLNALKIGLPLDDDIKTNSSLGVAAYWMHQHY GRWENYDDELRTVLSALYGDEWLDIITPLDQRNITLAAG >Mature_439_residues METPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQEENACAVIQFDDVFETAEQFTDAIIKHI IHFYHQRREGSAAAGITADWHPPELTSPGSHQVLFTIAKSLIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLTLTADLCL DPWLAERLRLVLYGELSDGIQSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPLNDPSRLA RLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENAIIADHPAGNKLVANALFGEASVYFSQK EYAMAAQCYESIAPYTEAAADAVLTIETWRMSAYCWWEDNYFTLAWNAGLNALKIGLPLDDDIKTNSSLGVAAYWMHQHY GRWENYDDELRTVLSALYGDEWLDIITPLDQRNITLAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49471; Mature: 49471
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQEENACAVI CCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEE QFDDVFETAEQFTDAIIKHIIHFYHQRREGSAAAGITADWHPPELTSPGSHQVLFTIAKS EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLTLTADLCLDPWLAERLRLVLYGELSDGI HHHHCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHEEEEECHHHHH QSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPLNDPSRLA HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH RLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENAIIADHPA HHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC GNKLVANALFGEASVYFSQKEYAMAAQCYESIAPYTEAAADAVLTIETWRMSAYCWWEDN CCCEEHHHHHCCHHEEECHHHHHHHHHHHHHHCCHHHHHCCEEEEEEEEEEEEEEEEECC YFTLAWNAGLNALKIGLPLDDDIKTNSSLGVAAYWMHQHYGRWENYDDELRTVLSALYGD EEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC EWLDIITPLDQRNITLAAG CHHHHHCCCCCCCEEEECC >Mature Secondary Structure METPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQEENACAVI CCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEE QFDDVFETAEQFTDAIIKHIIHFYHQRREGSAAAGITADWHPPELTSPGSHQVLFTIAKS EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLTLTADLCLDPWLAERLRLVLYGELSDGI HHHHCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHEEEEECHHHHH QSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPLNDPSRLA HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH RLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENAIIADHPA HHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC GNKLVANALFGEASVYFSQKEYAMAAQCYESIAPYTEAAADAVLTIETWRMSAYCWWEDN CCCEEHHHHHCCHHEEECHHHHHHHHHHHHHHCCHHHHHCCEEEEEEEEEEEEEEEEECC YFTLAWNAGLNALKIGLPLDDDIKTNSSLGVAAYWMHQHYGRWENYDDELRTVLSALYGD EEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC EWLDIITPLDQRNITLAAG CHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA