| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023008
Identifier: 170023008
GI number: 170023008
Start: 854863
End: 855738
Strand: Reverse
Name: 170023008
Synonym: YPK_0759
Alternate gene names: NA
Gene position: 855738-854863 (Counterclockwise)
Preceding gene: 170023009
Following gene: 170022996
Centisome position: 18.25
GC content: 50.23
Gene sequence:
>876_bases ATGCGCAGTAATAACAAATTTACATTAAAAAAATTGGCCCTGGCGTTGATGTTAGCAGGTTGCACCATAAGCAACGCTTA TGCCGTGCTCATTCCCGTGGCGGGTGCCATCCAGGGAAGCGCGCCCACCTTGAGTGCTCCATCAAATAGTGCGCTGCATG CCGTGGACCTGAGCAGCAATGCGACAGGAGCGGTACTGGCCAGTGGTGACACCATCACTCTAACCTATACCTACAACGAC GCTGACGAAGATCTGGATAATTCCACAAACTATGTGAACTGGTACTATACCAAGGGGGGGGTGGATACTCAGATTGCCAC GACCAATATCACTAACAGCCCGGCTAAAACTAACGATGGCAAAGGAAGGAGTGTGCTGATCATTCCTGCTACAGCAATTG GTGCGGATGCGATCAAGGTGGTGATACAGGAATTTTCAGCGTCCAGTGATCCGATAAGCGGTCAGACCATTTCCGTTGCT GATACCAGTACCGGTGGTGGTGGTACGACCACACGCCCTGGTCCTATAGCACCAGGTTCGAACGTGACACCAGGGATTTA CCTGAGCACCGATACCCTGTTTACCAACAACCTGCTTGGTTCAGAAACAATTCTGTCCGCAAACAATGTTTATGTGTTCA AACTGTGGGACAGCGAAGCCGTTGGAGTGATCGATTTAACCAATGCGGTCCATTACAACTGGCGCTTACTAGGAGACAGT GCGACTGATAGTGTTGCCGCACCGACAACGGGCTTTGTAACCAGTGTGTCTAATGCAGATTTTAGTGTTCCAATGAATAC CGCCGCGGACGGTACACAACTGACCGGTTCTGTCGATGGTATGCAGGGCTTCCAGTTAACGGTGGATTACAACTAA
Upstream 100 bases:
>100_bases GATAAATCTCGTTTAACATCATATAAAAACCAAAAACAATCCCATCCAAGGGAGTTGTATTTTTATTTTATAAAGATATT CTTACTAAGGGAAATATAAT
Downstream 100 bases:
>100_bases TCCCTGCCGTACTCGATGGTTACTGATACAGGCCGGTTTTCCCGCCTCAAACTGCTCCCCCGATAAGACAACGTTGAGCT ATGGGTAGGCAGAAGAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSNATGAVLASGDTITLTYTYND ADEDLDNSTNYVNWYYTKGGVDTQIATTNITNSPAKTNDGKGRSVLIIPATAIGADAIKVVIQEFSASSDPISGQTISVA DTSTGGGGTTTRPGPIAPGSNVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN
Sequences:
>Translated_291_residues MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSNATGAVLASGDTITLTYTYND ADEDLDNSTNYVNWYYTKGGVDTQIATTNITNSPAKTNDGKGRSVLIIPATAIGADAIKVVIQEFSASSDPISGQTISVA DTSTGGGGTTTRPGPIAPGSNVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN >Mature_291_residues MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSNATGAVLASGDTITLTYTYND ADEDLDNSTNYVNWYYTKGGVDTQIATTNITNSPAKTNDGKGRSVLIIPATAIGADAIKVVIQEFSASSDPISGQTISVA DTSTGGGGTTTRPGPIAPGSNVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29996; Mature: 29996
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSN CCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCEEEEEECCC ATGAVLASGDTITLTYTYNDADEDLDNSTNYVNWYYTKGGVDTQIATTNITNSPAKTNDG CCEEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC KGRSVLIIPATAIGADAIKVVIQEFSASSDPISGQTISVADTSTGGGGTTTRPGPIAPGS CCCEEEEEECHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC NVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS CCCCCEEEEECCEEECCCCCCCEEEECCCEEEEEEECCCCEEEEEECCEEEEEEEEECCC ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN CCCCCCCCCCCEEEEECCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECC >Mature Secondary Structure MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSN CCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCEEEEEECCC ATGAVLASGDTITLTYTYNDADEDLDNSTNYVNWYYTKGGVDTQIATTNITNSPAKTNDG CCEEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC KGRSVLIIPATAIGADAIKVVIQEFSASSDPISGQTISVADTSTGGGGTTTRPGPIAPGS CCCEEEEEECHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC NVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS CCCCCEEEEECCEEECCCCCCCEEEECCCEEEEEEECCCCEEEEEECCEEEEEEEEECCC ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN CCCCCCCCCCCEEEEECCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA