| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022981
Identifier: 170022981
GI number: 170022981
Start: 790308
End: 790904
Strand: Direct
Name: 170022981
Synonym: YPK_0732
Alternate gene names: NA
Gene position: 790308-790904 (Clockwise)
Preceding gene: 170022980
Following gene: 170022982
Centisome position: 16.85
GC content: 39.7
Gene sequence:
>597_bases ATGAACGGAATTGAAAATCATAAAAAAACGAATATATTTTTTATTGTTGAGCGGCTTTATCCTCGAGACAGTTTAGCGCC GTCTGTAGGGACTGTCGGGCCTTCTTTGGTACAAGTACACCGGATGATATACCAACTCACCAAAAAACAAGACGTTTTCT TGGATGGCGAGAAAGTCGATCTCAGTAATATCACTTTATGGCAGCGTCTTAAGTCTATTACCGGCGGTAAAATTACCACC AAAGATAGCCAAGAGGTTAAGTTCGCTTATGTTTTGGATTATGCCGGGAGTGAGTTTGCTGCTGTTCCTATTCAAGGTCT TAGACTTGAAGGTAATACTAATTACTTCTACAAAAAATTCACCAAAGAATATAAAATCTCGACGCCTAAACTTTTACACT ATGGTTCAGACACGATAAAAAATATCACTCTGCATGGCAGAAGTAATGTGTCTTTCTTTATGGATAACGGTGGCCGAAAT GCGCCAACGGCTGCGGCAAAATATAATAAAAACACCGGAGAAATATCATTGATTAAATCGATGCATGAGCTCTCTAAATC AATGCAGGACATCAAGAACAGCGGCGCGAGAACATGA
Upstream 100 bases:
>100_bases TTGTAAGAAACCACAAGTCAAGCAAGGATTTACGGACCGTAGGGATGATGGTAAGCTGAATCAAATCTGATTTTTATTTA AAGGAATAAAGGTTTAGCTT
Downstream 100 bases:
>100_bases TGCTTACCACGCCCAAATGGGGGCTACCTCTCCTTATCATTGTGTATGCGGCGATAGGGTTCGTGGTGCCGAACGCCTTG GTTGAGGTTTATTTTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MNGIENHKKTNIFFIVERLYPRDSLAPSVGTVGPSLVQVHRMIYQLTKKQDVFLDGEKVDLSNITLWQRLKSITGGKITT KDSQEVKFAYVLDYAGSEFAAVPIQGLRLEGNTNYFYKKFTKEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRN APTAAAKYNKNTGEISLIKSMHELSKSMQDIKNSGART
Sequences:
>Translated_198_residues MNGIENHKKTNIFFIVERLYPRDSLAPSVGTVGPSLVQVHRMIYQLTKKQDVFLDGEKVDLSNITLWQRLKSITGGKITT KDSQEVKFAYVLDYAGSEFAAVPIQGLRLEGNTNYFYKKFTKEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRN APTAAAKYNKNTGEISLIKSMHELSKSMQDIKNSGART >Mature_198_residues MNGIENHKKTNIFFIVERLYPRDSLAPSVGTVGPSLVQVHRMIYQLTKKQDVFLDGEKVDLSNITLWQRLKSITGGKITT KDSQEVKFAYVLDYAGSEFAAVPIQGLRLEGNTNYFYKKFTKEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRN APTAAAKYNKNTGEISLIKSMHELSKSMQDIKNSGART
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22275; Mature: 22275
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGIENHKKTNIFFIVERLYPRDSLAPSVGTVGPSLVQVHRMIYQLTKKQDVFLDGEKVD CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEC LSNITLWQRLKSITGGKITTKDSQEVKFAYVLDYAGSEFAAVPIQGLRLEGNTNYFYKKF CHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCEEEECCEEEEEECCCCHHHHHH TKEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRNAPTAAAKYNKNTGEISLIKS HHHHCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHCCCCCCHHHHHHH MHELSKSMQDIKNSGART HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNGIENHKKTNIFFIVERLYPRDSLAPSVGTVGPSLVQVHRMIYQLTKKQDVFLDGEKVD CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEC LSNITLWQRLKSITGGKITTKDSQEVKFAYVLDYAGSEFAAVPIQGLRLEGNTNYFYKKF CHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCEEEECCEEEEEECCCCHHHHHH TKEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRNAPTAAAKYNKNTGEISLIKS HHHHCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHCCCCCCHHHHHHH MHELSKSMQDIKNSGART HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA