| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022964
Identifier: 170022964
GI number: 170022964
Start: 777306
End: 777743
Strand: Direct
Name: 170022964
Synonym: YPK_0715
Alternate gene names: NA
Gene position: 777306-777743 (Clockwise)
Preceding gene: 170022963
Following gene: 170022968
Centisome position: 16.58
GC content: 50.46
Gene sequence:
>438_bases ATGAGCGATATGATCGACACACTCCAACAGCTTCAGCAATTGCGTCAGCGCTCGCTCAACCAGGTCACCAGCCAGTTAAC GCAGCAAAAACAGTTGTGTCAGCGCTATCAACGCAATATCAATGCACTAAATGCCTTAACCCTCTCTGAGGAGGCATTCC CCGGTGTTTCTGCGTTACAGATGGCGAATCACGCTGACTATCAGCGCCATATCCAACGGCTGATTGACTGGCAAAAACAG GAGCAGGCACTGGCTGATATCGAGGTTGGCAATCTACAGACACAGATGCAACAGCAGGCTCGCCGTGAAAAAATCGTGGC GGTAGTATTGGAACAACAACAAGAAGAATATCAACGTGAACAGGGGCGGTTGGCGCAAAAAAATACCGATGCGCTGGCAA CACAGTGCTGGCAACGTCAGCAGGCGGGCGATATTTAA
Upstream 100 bases:
>100_bases TCTGCGCCAGGAGGTAGGCCACCCGGCACTATTTTCTGCCAGCGTTGAACAACTGACCGGGATGTTCCCCTCCTTTGCCC CCACTGACGAGGCGTAATTC
Downstream 100 bases:
>100_bases TATCGCTCACCTCAAGCGACCATAAAAAAATCCGTCATAGGGAATATTCTCTATGACGGATTTTTTATTGGGTGGGAACA ATCCATAAAGTGACTACTGC
Product: flagellar export protein FliJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSEEAFPGVSALQMANHADYQRHIQRLIDWQKQ EQALADIEVGNLQTQMQQQARREKIVAVVLEQQQEEYQREQGRLAQKNTDALATQCWQRQQAGDI
Sequences:
>Translated_145_residues MSDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSEEAFPGVSALQMANHADYQRHIQRLIDWQKQ EQALADIEVGNLQTQMQQQARREKIVAVVLEQQQEEYQREQGRLAQKNTDALATQCWQRQQAGDI >Mature_144_residues SDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSEEAFPGVSALQMANHADYQRHIQRLIDWQKQE QALADIEVGNLQTQMQQQARREKIVAVVLEQQQEEYQREQGRLAQKNTDALATQCWQRQQAGDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16919; Mature: 16788
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSEEAFPGVSALQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH MANHADYQRHIQRLIDWQKQEQALADIEVGNLQTQMQQQARREKIVAVVLEQQQEEYQRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGRLAQKNTDALATQCWQRQQAGDI HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSEEAFPGVSALQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH MANHADYQRHIQRLIDWQKQEQALADIEVGNLQTQMQQQARREKIVAVVLEQQQEEYQRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGRLAQKNTDALATQCWQRQQAGDI HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA