| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022935
Identifier: 170022935
GI number: 170022935
Start: 747130
End: 748011
Strand: Reverse
Name: 170022935
Synonym: YPK_0686
Alternate gene names: NA
Gene position: 748011-747130 (Counterclockwise)
Preceding gene: 170022936
Following gene: 170022934
Centisome position: 15.95
GC content: 34.58
Gene sequence:
>882_bases ATGAATCGAAAATTTCTTATATTATTTTCACTCCTGATTGTTGCCATCGGAATCTCCGGCATTCTGTTAAACCCTGATAA GGAGATACCTGAATTACTGAATCAGGCAGAGAAAAGAAAAGAGAGAAACATTGTATTAGCCCAAACACGCCATGACCTTA CCGCCGGTAGATTAATATCTAAAGAAGATTATTCATTACAGAATATCATCGTAGATGAATCAAGTGACTTGGTTAAAAAT GATCTATCACATGGTCATAGAATTGATGGTGATAGAATTAATGGCGATAGAACTGATGACGATAGAACTGATGATCACAG ACTTGATGGCCATCTATTAAAAAACAATATTTTAGCGGGATCGTATCTTACCGATGAAATGTTAATCTCGCCCAGTAGTC GTGAATTTTCACGGCTAAATTTAAAACACGGAGAGATCATTTATAAATTTTACATTACAGAAAAAAACGAATACCTACTA AAAACCTTAAATCCAGGTGACTTTCTTTCATTCCAATTACTGACACTTGAAACCAATAAAACCAAAGGAATGGAAAATGG TATTGCTATTGATAGCAAGAGTATGAATAGTAAACAAAGGCAAAAGTATTCACTTAATAACGTGATACCTGACATGCCGA TATTAAGTATTAAAACGTACTCTCCTGAGGAATTATCAGTAAAAAACAACAAAAACAATAAGACTGAAGAGTATTCCCTA GGATATATTGAAGTGATAATGAAAATACAAGATCTCGAATTCATCCATACGGTGGAAAAAGCCGGTGAGGTGTTTTTAAC CCCCAAGAGTGGTGATCACAAACGAATAGATTTGGATGACATAATCCCTACATTACAAACAATAAGAGAGCTAAGAGGAT GA
Upstream 100 bases:
>100_bases CTACGCCGTTGCTATCACTGCCGGGTTTCTATCATCTGTACTAATTTAAGTGGCTGAAATAAATTGATTTATCACGATAG CATGACAAAAGGTACGAATA
Downstream 100 bases:
>100_bases ATGTATATAAATTAAAAGATAAAAAAAAATATAATTATATTCTTGTCTATTGTTATTCTCTATTTTTTGTTTGAAAATTC AGCTAACGCCAAGCAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLNQAEKRKERNIVLAQTRHDLTAGRLISKEDYSLQNIIVDESSDLVKN DLSHGHRIDGDRINGDRTDDDRTDDHRLDGHLLKNNILAGSYLTDEMLISPSSREFSRLNLKHGEIIYKFYITEKNEYLL KTLNPGDFLSFQLLTLETNKTKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSL GYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG
Sequences:
>Translated_293_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLNQAEKRKERNIVLAQTRHDLTAGRLISKEDYSLQNIIVDESSDLVKN DLSHGHRIDGDRINGDRTDDDRTDDHRLDGHLLKNNILAGSYLTDEMLISPSSREFSRLNLKHGEIIYKFYITEKNEYLL KTLNPGDFLSFQLLTLETNKTKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSL GYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG >Mature_293_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLNQAEKRKERNIVLAQTRHDLTAGRLISKEDYSLQNIIVDESSDLVKN DLSHGHRIDGDRINGDRTDDDRTDDHRLDGHLLKNNILAGSYLTDEMLISPSSREFSRLNLKHGEIIYKFYITEKNEYLL KTLNPGDFLSFQLLTLETNKTKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSL GYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33553; Mature: 33553
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKFLILFSLLIVAIGISGILLNPDKEIPELLNQAEKRKERNIVLAQTRHDLTAGRLIS CCCEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHCCEEC KEDYSLQNIIVDESSDLVKNDLSHGHRIDGDRINGDRTDDDRTDDHRLDGHLLKNNILAG CCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCEEEC SYLTDEMLISPSSREFSRLNLKHGEIIYKFYITEKNEYLLKTLNPGDFLSFQLLTLETNK CEECHHEEECCCCCCHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEEEEEEECCC TKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSL CCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCHHHCC GYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRKFLILFSLLIVAIGISGILLNPDKEIPELLNQAEKRKERNIVLAQTRHDLTAGRLIS CCCEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHCCEEC KEDYSLQNIIVDESSDLVKNDLSHGHRIDGDRINGDRTDDDRTDDHRLDGHLLKNNILAG CCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCEEEC SYLTDEMLISPSSREFSRLNLKHGEIIYKFYITEKNEYLLKTLNPGDFLSFQLLTLETNK CEECHHEEECCCCCCHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEEEEEEECCC TKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKTEEYSL CCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCHHHCC GYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHKRIDLDDIIPTLQTIRELRG HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA