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The map label for this gene is 170022929

Identifier: 170022929

GI number: 170022929

Start: 741391

End: 742224

Strand: Reverse

Name: 170022929

Synonym: YPK_0680

Alternate gene names: NA

Gene position: 742224-741391 (Counterclockwise)

Preceding gene: 170022930

Following gene: 170022928

Centisome position: 15.83

GC content: 30.94

Gene sequence:

>834_bases
ATGAGAATTATTTTCTTCACGTTATTAATACTATTTGGTTTGATTATCATATTAAAAGTCAACTCACGTTCAAGAAGAAT
ATCAATTTATAATAAAATAAATTCGCGTGAAAACAAAAGCAAAGAGACAAATAATGACACAAAAGATAAACCGACCGTAC
TGTCTGATTTTATAAAGCTCCCTGTTGTTTTATCTAACATTTTGTATCTAAAGGTTTTGATTATTATTTTTATATTATCC
ATCCTTGCAATATTGGCTATTTTTAATGTAGTGAATATCAATCAAAAAACACTACTCACTATTGGGCTACTCTCTATTAT
CACCACCTTATATGCGCCAAGAATGATAATTAAAAATGCACTCACTAAAAGAACAAATACTTTATTGAAATCTTTACCTT
TCTTTATTGATATTACAGCGGCATGCGTTCAATCTGGCATGACAATAGAGAATTCATTAAATTATACCACACAAAAATTC
CAAACAATAAATACCGACCTATGCTTGATTATGTCAAAAGTGACCAAGCGTGCTGAAATAAATGGTTTAGAAAATGCGAT
TAAAGAACTTCAATATTACTCACCAGCAATAGAAATGAAAATGTTTTGCAGCACACTGCAATACAGTCTTAGTTTTGGCT
CAACGGTGTACGAACAACTGACTCACTTATCACAAGATATGAGAGAAATGCAGCTACTGATGACAGAAGAGAGCATCAGT
AAATTATCCACAAAACTGACACTGCCATTATTTTTATTTATTTTGATCCCTTTCGTCTTATTGGTTATCTCACCGAGTAT
TCTGGAGCTACTTAACTATGTTAAAAATATTTAA

Upstream 100 bases:

>100_bases
TTGTATGGCATCATCCCACAGGTAGATTTATTATCTATTATATTATTATCAGTGAGGTTATTGGCATATTAATTATCAGA
AAAATGCTAGGTAAATCCCT

Downstream 100 bases:

>100_bases
TACTATTATTATCATCCCAGTGATGCTTTTTCTGTTAAGCGGTTGTTTGAGCCAACAGGGTTTAAGCTCACAAGGTTTAA
GCACAAAAGAATTTTCTTAT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Tight Adherence Protein C; TadC Protein; Bacterial Type II Secretion System Protein; Type II Secretion System Protein; Bacterial Type II Secretion System Protein F; Tight Adherance Operon Protein C; Tight Adherance Operon Protein

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRIIFFTLLILFGLIIILKVNSRSRRISIYNKINSRENKSKETNNDTKDKPTVLSDFIKLPVVLSNILYLKVLIIIFILS
ILAILAIFNVVNINQKTLLTIGLLSIITTLYAPRMIIKNALTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKF
QTINTDLCLIMSKVTKRAEINGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI

Sequences:

>Translated_277_residues
MRIIFFTLLILFGLIIILKVNSRSRRISIYNKINSRENKSKETNNDTKDKPTVLSDFIKLPVVLSNILYLKVLIIIFILS
ILAILAIFNVVNINQKTLLTIGLLSIITTLYAPRMIIKNALTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKF
QTINTDLCLIMSKVTKRAEINGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI
>Mature_277_residues
MRIIFFTLLILFGLIIILKVNSRSRRISIYNKINSRENKSKETNNDTKDKPTVLSDFIKLPVVLSNILYLKVLIIIFILS
ILAILAIFNVVNINQKTLLTIGLLSIITTLYAPRMIIKNALTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKF
QTINTDLCLIMSKVTKRAEINGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31604; Mature: 31604

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIFFTLLILFGLIIILKVNSRSRRISIYNKINSRENKSKETNNDTKDKPTVLSDFIKL
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHH
PVVLSNILYLKVLIIIFILSILAILAIFNVVNINQKTLLTIGLLSIITTLYAPRMIIKNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKFQTINTDLCLIMSKVTKRAEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
NGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MRIIFFTLLILFGLIIILKVNSRSRRISIYNKINSRENKSKETNNDTKDKPTVLSDFIKL
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHH
PVVLSNILYLKVLIIIFILSILAILAIFNVVNINQKTLLTIGLLSIITTLYAPRMIIKNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKFQTINTDLCLIMSKVTKRAEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
NGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA