| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022927
Identifier: 170022927
GI number: 170022927
Start: 740167
End: 740640
Strand: Reverse
Name: 170022927
Synonym: YPK_0678
Alternate gene names: NA
Gene position: 740640-740167 (Counterclockwise)
Preceding gene: 170022928
Following gene: 170022926
Centisome position: 15.79
GC content: 36.71
Gene sequence:
>474_bases ATGATGAGAGATACCATATTACGTTTATTGCCGGCGAATAGAGGGTCTATTGCTGTTGAATTTACGTTAATTTTTATCCT TTTTATCTTTATGCTGCTATTGGTTGCTGAAACCTCCCGCTTGTTTTATATCTCGGCTAATCTTGATTTCGCATTATCTG AAGCAGCTAAAACCGCTAAAAATAGAGATGACGAGAACGTACTTTCTTATCAACAACTTTTTGAGCATAATTTTAATCGA CAAGTTACTGTTCTGGGATCATTGATTAATACCGCGCCCCCCGCAGAACTTACGGTTAATTTTAGTCACAGTGTTGCTGA TCTTATTAATGGCAATAGTGAAGAAAATAATCACATTCTACCACTTGCCCACTATCAGGTTAGATTACATTACCAACCGA TATTTTTACCTTTCCCTCAAGCATGGGTAAATACGTTATTGTCCAGGGAGGTGATTTTTGTTCAGGAAAAATAA
Upstream 100 bases:
>100_bases TTATTGAAGCAGAGCGGTTATCTGATAATGCTGACGAGTTAGTATTAGCGCTGAGTCAGGTTGATTCATTCCCTCAGAAA CAATCCGTCATTAGGGAAAA
Downstream 100 bases:
>100_bases TACGTTAATCAATAATCAAGGTGGTTCAATTATTGTTGAATTTGCATTTGTGACTTTTATTATTGTTCTATTTATAAAAC TGCTGATTGCCATCGCTGAA
Product: TadE family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MMRDTILRLLPANRGSIAVEFTLIFILFIFMLLLVAETSRLFYISANLDFALSEAAKTAKNRDDENVLSYQQLFEHNFNR QVTVLGSLINTAPPAELTVNFSHSVADLINGNSEENNHILPLAHYQVRLHYQPIFLPFPQAWVNTLLSREVIFVQEK
Sequences:
>Translated_157_residues MMRDTILRLLPANRGSIAVEFTLIFILFIFMLLLVAETSRLFYISANLDFALSEAAKTAKNRDDENVLSYQQLFEHNFNR QVTVLGSLINTAPPAELTVNFSHSVADLINGNSEENNHILPLAHYQVRLHYQPIFLPFPQAWVNTLLSREVIFVQEK >Mature_157_residues MMRDTILRLLPANRGSIAVEFTLIFILFIFMLLLVAETSRLFYISANLDFALSEAAKTAKNRDDENVLSYQQLFEHNFNR QVTVLGSLINTAPPAELTVNFSHSVADLINGNSEENNHILPLAHYQVRLHYQPIFLPFPQAWVNTLLSREVIFVQEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17976; Mature: 17976
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRDTILRLLPANRGSIAVEFTLIFILFIFMLLLVAETSRLFYISANLDFALSEAAKTAK CCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHC NRDDENVLSYQQLFEHNFNRQVTVLGSLINTAPPAELTVNFSHSVADLINGNSEENNHIL CCCCHHHHHHHHHHHCCCCCEEEHEEHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCEEE PLAHYQVRLHYQPIFLPFPQAWVNTLLSREVIFVQEK EEEEEEEEEEECEEEEECCHHHHHHHHCCCEEEEECC >Mature Secondary Structure MMRDTILRLLPANRGSIAVEFTLIFILFIFMLLLVAETSRLFYISANLDFALSEAAKTAK CCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHC NRDDENVLSYQQLFEHNFNRQVTVLGSLINTAPPAELTVNFSHSVADLINGNSEENNHIL CCCCHHHHHHHHHHHCCCCCEEEHEEHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCEEE PLAHYQVRLHYQPIFLPFPQAWVNTLLSREVIFVQEK EEEEEEEEEEECEEEEECCHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA