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The map label for this gene is ygiQ [C]

Identifier: 170022917

GI number: 170022917

Start: 727776

End: 730103

Strand: Direct

Name: ygiQ [C]

Synonym: YPK_0666

Alternate gene names: 170022917

Gene position: 727776-730103 (Clockwise)

Preceding gene: 170022916

Following gene: 170022920

Centisome position: 15.52

GC content: 51.76

Gene sequence:

>2328_bases
ATGAGTATCAGCTTGATCCAACCAGAGCGTGACCTATTTTCTTATCAGCCTTATTGGGCTGAATGCTATGGCACCGCGCC
ATTCTTACCTATGTCACGGGAGGAAATGGACATATTGGGTTGGGACAGTTGCGATATCATTGTCATCACTGGTGATGCCT
ATGTTGACCACCCAAGCTTTGGTATGGCCATCGTTGGCCGTATGCTGGAAGCTCAGGGATTTCGGGTCGGGATTATTGCT
CAGCCAGATTGGACGAATAAACATGATTTTATGCGTCTGGGAGAGCCGAATCTGTTCTTTGGTGTCACGGCGGGCAATAT
GGATTCGATGATCAACCGCTATACGGCTGACCGAAAACTGCGCCACGATGATGCTTATACGCCGGATAACCAGAGTGGTA
AGCGGCCAGATCGCGCGACATTGGTGTATAGCCAACGCTGCAAAGAAGCCTATAGCCATGTGCCGGTATTACTGGGCGGC
ATCGAGGCCAGCCTGCGCCGTATTGCTCACTATGACTATTGGTCTGATACTGTGCGCCGCTCGGTGATCGTAGATGCTAA
AGCGGACATGCTGGTGTATGGCAATGGCGAACGGCCATTGGTGGAAGTGGCGCACCGTTTGGCTGCGGGTGAGAAAATTA
CGGATATTCAGGATGTCCGTAACACCGTTGTGATGCGTAAAACGCCCTTACCGGGCTGGAGCGGGGTGGATTCTACCCGT
CTGGATAAACCGGGCCGTATTGAAGCCATTCCCAATCCTTACGGTGAAGATCTGCCGTGTGCGACCGATGACATATCGAT
ACCGGAGGCCAAACCAATAACCGTGCGTGCGGCCAAACCGAAGCCATGGGAAAAGACCTACGTTTTACTGCCTTCATATG
AAAAAGTGAAGGCGGACAAAGTGTTGTATGCCCATACCTCGCGGATTTTGCATCATGAAACTAATCCCGGTTGTGCGCGG
GCGTTGATGCAGAAACATGGCGATCGCTATATTTGGATTAACCCACCGGCGATCCCGCTAAGTACCGAAGAGATGGACAG
TGTATTTGCACTGCCTTATCAGCGCGTCCCGCACCCGTCCTACGGAAAATCGCCGATCCCGGCCTATGACATGATTCGTT
TTTCGATCAATATCATGCGCGGCTGTTATGGCGGTTGCTCCTTCTGCTCTATTACGGAGCATGAAGGGCGCATTATTCAG
AGCCGCTCTGAAGATTCTATTATTCGTGAAATCGAAGAGATTCGCGATAAAGTCCCTGGTTTTACCGGTATTATCTCTGA
TCTTGGCGGGCCTACCGCGAATATGTATATGCTGCGCTGCCAGTCCCCTCGGGCTGAACAAACCTGCCGCCGGGCGTCTT
GTGTGTATCCTGAGATTTGCCCGCACATGGATACCAACCATCAACCGACGATCTCTTTGTACCGTCGAGCCCGTGATTTG
AAAGGGATCAAAAAGATCCTGATCGCCTCCGGCGTTCGCTACGATTTGGCAGTAGAAGATCCGCGTTATATCAAAGAGTT
GGCCAGCCACCATGTGGGCGGTTATTTGAAAATCGCACCAGAGCATACTGAGGAAGGGCCGCTTTCTAAAATGATGAAAC
CGGGTATGGGCAGCTATCAGCGCTTCAAGGAACTGTTTGATACTTACTCGAAACAGGCCGGTAAAGAGCAGTATTTGATC
CCTTATTTCATCTCCGCACATCCGGGTACTGAAGATAAAGATATGGTGAACCTGGCGCTGTGGCTGAAGAAAAACCGCTT
CCGATTGGATCAGGTGCAAAATTTCTATCCGTCACCGTTGGCTAACTCGACCACCATGTATTACACCGGTAAGAACCCGT
TGGCGAAAGTGGATTATAAAAGTGAAGAGGTGGTGGTTCCCAAAGGGGATCGTCAACGGCGGTTACATAAAGCATTACTG
CGTTATCATGATCCGGCTAACTGGCCGATGCTCCGCAGTGCGCTTGAAGATATGGGGCTGCAACATTTGATTGGCGCTCG
TCGTGAATGCCTGGTGCCGGCTCCGACCTTGGAAGAGCAGCGTGAGGCACGCCGTGCTCTGCGCCACCACACACCGGCAC
TGACCAAGCACACATCGATCACCCGCCAGCGCCAGCCGAGTAATAGAGCACCCGCAGCCTCTGCTGGCAAGAAGGCTCCG
ACGGTGGCCAATGGCACTTCTTCAGCGCACAGTACTTCTGCAAACCAAAGTACTTCTGCAGCCCACAGTACGCTCGCAAC
CAAAAAATCAGCGGGTAAAACGGGCGTAAATAAAGCTGCGGTCAATAAGCCATCTGCCGGATCCAGAGGGAAAAACAGAC
AGCATTAA

Upstream 100 bases:

>100_bases
TATCCTTCCTCTTCACATGGATAACTGCGTATAATCGCCGGCCGGTGATGATTTCTTAACCCGAACCACCTCAACTTTCC
CCCTATTAAAGAGTGTTGCC

Downstream 100 bases:

>100_bases
GGGGTTATTGCTGGCCTGAAATCAGCGGTCGGATCCGAAAACTTCCGGGTCTGGCCCCAGCCGTTTACCGCAATCCAGTT
TGGTAATTGCCAGCAACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 775; Mature: 774

Protein sequence:

>775_residues
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIA
QPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGG
IEASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCAR
ALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQ
SRSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
KGIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLI
PYFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALL
RYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAP
TVANGTSSAHSTSANQSTSAAHSTLATKKSAGKTGVNKAAVNKPSAGSRGKNRQH

Sequences:

>Translated_775_residues
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIA
QPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGG
IEASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCAR
ALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQ
SRSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
KGIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLI
PYFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALL
RYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAP
TVANGTSSAHSTSANQSTSAAHSTLATKKSAGKTGVNKAAVNKPSAGSRGKNRQH
>Mature_774_residues
SISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIAQ
PDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGI
EASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTRL
DKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCARA
LMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQS
RSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDLK
GIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIP
YFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLR
YHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAPT
VANGTSSAHSTSANQSTSAAHSTLATKKSAGKTGVNKAAVNKPSAGSRGKNRQH

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=727, Percent_Identity=82.8060522696011, Blast_Score=1285, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 87061; Mature: 86930

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSF
CCCEEECCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCEECCCCH
GMAIVGRMLEAQGFRVGIIAQPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKL
HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHEECCCCEEEEEECCCHHHHHHHHHHHHHH
RHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGIEASLRRIAHYDYWSDTVRR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHH
SVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
EEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCC
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADK
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHH
VLYAHTSRILHHETNPGCARALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPS
HHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCC
YGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDKVPG
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCC
FTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHH
KGIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQ
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCHHH
RFKELFDTYSKQAGKEQYLIPYFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPL
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHEEEEEEHHCCCCCHHHHHHCCCCCC
ANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLRYHDPANWPMLRSALEDMGL
CCCEEEEEECCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
QHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAP
HHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
TVANGTSSAHSTSANQSTSAAHSTLATKKSAGKTGVNKAAVNKPSAGSRGKNRQH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSF
CCEEECCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCEECCCCH
GMAIVGRMLEAQGFRVGIIAQPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKL
HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHEECCCCEEEEEECCCHHHHHHHHHHHHHH
RHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGIEASLRRIAHYDYWSDTVRR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHH
SVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
EEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCC
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADK
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHH
VLYAHTSRILHHETNPGCARALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPS
HHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCC
YGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDKVPG
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCC
FTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHH
KGIKKILIASGVRYDLAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYQ
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCHHH
RFKELFDTYSKQAGKEQYLIPYFISAHPGTEDKDMVNLALWLKKNRFRLDQVQNFYPSPL
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHEEEEEEHHCCCCCHHHHHHCCCCCC
ANSTTMYYTGKNPLAKVDYKSEEVVVPKGDRQRRLHKALLRYHDPANWPMLRSALEDMGL
CCCEEEEEECCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
QHLIGARRECLVPAPTLEEQREARRALRHHTPALTKHTSITRQRQPSNRAPAASAGKKAP
HHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
TVANGTSSAHSTSANQSTSAAHSTLATKKSAGKTGVNKAAVNKPSAGSRGKNRQH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]