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The map label for this gene is xisE [H]

Identifier: 170022883

GI number: 170022883

Start: 689529

End: 689768

Strand: Reverse

Name: xisE [H]

Synonym: YPK_0632

Alternate gene names: 170022883

Gene position: 689768-689529 (Counterclockwise)

Preceding gene: 170022885

Following gene: 170022876

Centisome position: 14.71

GC content: 42.92

Gene sequence:

>240_bases
ATGGCAAGATTAATAACACTGTATGAATGGGCTATTGAAGAGTTTGGTGATGCTGCGCCCGGCAAGGCGACACTTTGTAA
CTATGCAAAGCAAGGAATGATTTATCCGCCAGCCCTAAAAGTTGGTAGATCGTGGATGGTTGAGAAAGACACCCGATTTG
TCGGTTCAGATAAGCCTCTGATAAGGCATACAGATCACTCATTGCTCAAAAAAATCTTGATGGATGGATATAGCGACTAA

Upstream 100 bases:

>100_bases
GTTTAAAATGGCACCTTCCTTAATTGGTTAGTGCATTTTTTATTGAAATGACTACACGGAATAATGAACGGCATTAAACA
AACCATGAAAAGGATTCAAA

Downstream 100 bases:

>100_bases
GTCTTTTTACTGGAAGAAAAACATTTTATTCATCGCAGAAATAAAAAAGCACCAGAACAAATCTGATGCTTTGGCGTTTT
GATAGATCACAATTCTAATA

Product: putative excisionase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MARLITLYEWAIEEFGDAAPGKATLCNYAKQGMIYPPALKVGRSWMVEKDTRFVGSDKPLIRHTDHSLLKKILMDGYSD

Sequences:

>Translated_79_residues
MARLITLYEWAIEEFGDAAPGKATLCNYAKQGMIYPPALKVGRSWMVEKDTRFVGSDKPLIRHTDHSLLKKILMDGYSD
>Mature_78_residues
ARLITLYEWAIEEFGDAAPGKATLCNYAKQGMIYPPALKVGRSWMVEKDTRFVGSDKPLIRHTDHSLLKKILMDGYSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To lambdoid phages excisionases [H]

Homologues:

Organism=Escherichia coli, GI1787387, Length=77, Percent_Identity=42.8571428571429, Blast_Score=68, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR012884 [H]

Pfam domain/function: PF07825 Exc [H]

EC number: NA

Molecular weight: Translated: 8961; Mature: 8829

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLITLYEWAIEEFGDAAPGKATLCNYAKQGMIYPPALKVGRSWMVEKDTRFVGSDKPL
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEECCCCCCC
IRHTDHSLLKKILMDGYSD
EECCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARLITLYEWAIEEFGDAAPGKATLCNYAKQGMIYPPALKVGRSWMVEKDTRFVGSDKPL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEECCCCCCC
IRHTDHSLLKKILMDGYSD
EECCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]