| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170022479
Identifier: 170022479
GI number: 170022479
Start: 255478
End: 256041
Strand: Direct
Name: 170022479
Synonym: YPK_0218
Alternate gene names: NA
Gene position: 255478-256041 (Clockwise)
Preceding gene: 170022441
Following gene: 170022481
Centisome position: 5.45
GC content: 43.26
Gene sequence:
>564_bases ATGAGTGGAAGTAAAGTAAAAGAATTTACTTTTGAGGCTGAAGGAAAAGAAGAACTCAAAGAGCGCTTGAGAGAGCTTGT TGGTACTAGGAGCGTACGGGCAGCAGCAAGGGACTGGGGACTGTCTTTTTCCACATTAAATAATTATTTAACCAAGAGTA CTGAGCCTGCCTTTACTGCCATGCAGAAAATTGCACATAAGGAGCGAGTTAGCCTTGATTGGCTAGCATATGGATCAGCA TCTACCACAACCAAAACAACTAACCATGACCTTGGTGAAGCTGCAAAAGAACATAAAGCTAAAGGGAAGTTAACTAGCGC TTGGCTAGCCGTGCTTGATTCTCTTGATGAAAATGAAGCACAGGCTTTATTAAGGGTAATTCACAAAAAGGGAGTTGATG GCATAGTCCAGGTGGCTGCTGCTAATTCTCTTGATATAGGGCTACTACAGCTACCAACTGAAGAGAAGGAACGCCTGATG GCATTGCACGAAGCTAAAAAAGGGGCATCTGAAAGTTGCGTAGAAAATAACTCTGTCGACGAATCACAGAAGAAGGCTGG ATGA
Upstream 100 bases:
>100_bases CACGTAAAGTAAAAATATGACTTTCTTTGCTCCTTATAGAGATCAATTGATTTTAATAAGGAGTAACAATTAATAATCAA AGAGTTAAAAGGAAAAGAAA
Downstream 100 bases:
>100_bases TTGTATTATGGTAACGCAATCATCTTTTTTAAATGTTGTTTAAGATCTGATTAAAATGGTTTGAACGATGATCTAAATTG TGCAGAATAGAATGCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSGSKVKEFTFEAEGKEELKERLRELVGTRSVRAAARDWGLSFSTLNNYLTKSTEPAFTAMQKIAHKERVSLDWLAYGSA STTTKTTNHDLGEAAKEHKAKGKLTSAWLAVLDSLDENEAQALLRVIHKKGVDGIVQVAAANSLDIGLLQLPTEEKERLM ALHEAKKGASESCVENNSVDESQKKAG
Sequences:
>Translated_187_residues MSGSKVKEFTFEAEGKEELKERLRELVGTRSVRAAARDWGLSFSTLNNYLTKSTEPAFTAMQKIAHKERVSLDWLAYGSA STTTKTTNHDLGEAAKEHKAKGKLTSAWLAVLDSLDENEAQALLRVIHKKGVDGIVQVAAANSLDIGLLQLPTEEKERLM ALHEAKKGASESCVENNSVDESQKKAG >Mature_186_residues SGSKVKEFTFEAEGKEELKERLRELVGTRSVRAAARDWGLSFSTLNNYLTKSTEPAFTAMQKIAHKERVSLDWLAYGSAS TTTKTTNHDLGEAAKEHKAKGKLTSAWLAVLDSLDENEAQALLRVIHKKGVDGIVQVAAANSLDIGLLQLPTEEKERLMA LHEAKKGASESCVENNSVDESQKKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20442; Mature: 20311
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSKVKEFTFEAEGKEELKERLRELVGTRSVRAAARDWGLSFSTLNNYLTKSTEPAFTA CCCCCCHHHEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH MQKIAHKERVSLDWLAYGSASTTTKTTNHDLGEAAKEHKAKGKLTSAWLAVLDSLDENEA HHHHHHHHHCCHHHEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH QALLRVIHKKGVDGIVQVAAANSLDIGLLQLPTEEKERLMALHEAKKGASESCVENNSVD HHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCC ESQKKAG CHHHCCC >Mature Secondary Structure SGSKVKEFTFEAEGKEELKERLRELVGTRSVRAAARDWGLSFSTLNNYLTKSTEPAFTA CCCCCHHHEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH MQKIAHKERVSLDWLAYGSASTTTKTTNHDLGEAAKEHKAKGKLTSAWLAVLDSLDENEA HHHHHHHHHCCHHHEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH QALLRVIHKKGVDGIVQVAAANSLDIGLLQLPTEEKERLMALHEAKKGASESCVENNSVD HHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCC ESQKKAG CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA