| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022468
Identifier: 170022468
GI number: 170022468
Start: 249044
End: 249286
Strand: Reverse
Name: 170022468
Synonym: YPK_0207
Alternate gene names: NA
Gene position: 249286-249044 (Counterclockwise)
Preceding gene: 170022469
Following gene: 170022467
Centisome position: 5.32
GC content: 48.97
Gene sequence:
>243_bases ATGAGCCATTTTCTAAAAGGCATGTCAGCCGAGAAATTCAATCAAAAATACCCTGTTGGTTGCAGTTTCAATTATTTCCC TAACAGGGGTATCCCTGACAGCGTCGAGGTAGTCACCCGCACTGAAGCTTGGGCATTAGGGCATGGTGCTGTGGTGGTTA GCGTCAATGGTCGCGCAGGTGGAGTGAGCCTTGAACATCTGAAGCCAGTCATCACACGTGTGGGAGAGCCTAATGGAAAT TGA
Upstream 100 bases:
>100_bases ATTTCTTTAATCATTGTGGGAATACAGTTCACAAAAACCAGCAACGTGTGGCCATGAAACAAGCCGTTGAACACCATAAA AAACAGTGGAAGGTGAAGCC
Downstream 100 bases:
>100_bases AATTAGCCAATCAATGAAAATGCGTCTTTCTGGTCTGGAACGCCTAGACCCTGTTGAGGTTCTGGTTGATGACTATGAGC CAGGCAAAGGGAAAATTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSHFLKGMSAEKFNQKYPVGCSFNYFPNRGIPDSVEVVTRTEAWALGHGAVVVSVNGRAGGVSLEHLKPVITRVGEPNGN
Sequences:
>Translated_80_residues MSHFLKGMSAEKFNQKYPVGCSFNYFPNRGIPDSVEVVTRTEAWALGHGAVVVSVNGRAGGVSLEHLKPVITRVGEPNGN >Mature_79_residues SHFLKGMSAEKFNQKYPVGCSFNYFPNRGIPDSVEVVTRTEAWALGHGAVVVSVNGRAGGVSLEHLKPVITRVGEPNGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8614; Mature: 8483
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFLKGMSAEKFNQKYPVGCSFNYFPNRGIPDSVEVVTRTEAWALGHGAVVVSVNGRAG CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCEEEEEECCCCC GVSLEHLKPVITRVGEPNGN CEEHHHHHHHHHHCCCCCCC >Mature Secondary Structure SHFLKGMSAEKFNQKYPVGCSFNYFPNRGIPDSVEVVTRTEAWALGHGAVVVSVNGRAG CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCEEEEEECCCCC GVSLEHLKPVITRVGEPNGN CEEHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA