Click here to switch to the map view.

The map label for this gene is 170022460

Identifier: 170022460

GI number: 170022460

Start: 245621

End: 246259

Strand: Reverse

Name: 170022460

Synonym: YPK_0199

Alternate gene names: NA

Gene position: 246259-245621 (Counterclockwise)

Preceding gene: 170022461

Following gene: 170022459

Centisome position: 5.25

GC content: 49.77

Gene sequence:

>639_bases
ATGCAAATCTCCCTATCACAGTTTCAACTCGCCGCCTCTTTATCTCCCGCGCTCGCATCGCGTTGGTATCCGCATATCTT
GTCAGCAATGAAAGAGTTCGGTATTGATACCCCCCGTCGCCAGGCTGCGTTTATTGCACAAATCGGGCATGAAAGCAGGG
ATTTTAAAGCACTGGTCGAGTCATTTAATTACAGCGTAGTGGGCTTAAAAACCACCTTTAGTAGCCGTTTAACAGCCGGG
CAATGCGAGATGTTGGGCCGCCAACCTGGCGAGACCGTTGTCCCTATTGAACGACAAAAAGCCATTGCCAACCTTGTTTA
CAGCAAACGCTATGGTAACAACGCGCCCGGCGATGGCTGGAAATTCCGTGGCCGTGGACTGAAGCAAATCACCTTTTTGG
ATAATTATTACCGTTGTGGCCATGCGCTAGAAATCGACTTGATCATCAACCCAGATTTACTGCTGCAAGATGATTATGCC
GCACGCTCTGCGGGTTGGTTCTGGTACGTAAACAACTGTAACGAATATGCGGACAACGGTAGCTTTGTTCGCTTGACCAA
AGTGATTAACGGCGGCACTAACGGCCTGGCTGACCGTCAGGCTCGGTTATTAGTTGCCGAGCGTGTCCTATGTCCATAA

Upstream 100 bases:

>100_bases
AAGTTTTAATCAAATAGTTGATTGGACACTGAACCCCTTCCACTGATTATATAAAACCCTAATAGCAATACTGACACCAT
CCCAACCCTTGGATGGTGTC

Downstream 100 bases:

>100_bases
TGAAAACCCTCAAAGAATTAATCACCAACCCTTCATCCGGGCGATTATCTACCTCAGATACCACTCTGGTGGGGGCGTTT
ATCGTGTCCTCTCTCGCGTT

Product: putative endolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MQISLSQFQLAASLSPALASRWYPHILSAMKEFGIDTPRRQAAFIAQIGHESRDFKALVESFNYSVVGLKTTFSSRLTAG
QCEMLGRQPGETVVPIERQKAIANLVYSKRYGNNAPGDGWKFRGRGLKQITFLDNYYRCGHALEIDLIINPDLLLQDDYA
ARSAGWFWYVNNCNEYADNGSFVRLTKVINGGTNGLADRQARLLVAERVLCP

Sequences:

>Translated_212_residues
MQISLSQFQLAASLSPALASRWYPHILSAMKEFGIDTPRRQAAFIAQIGHESRDFKALVESFNYSVVGLKTTFSSRLTAG
QCEMLGRQPGETVVPIERQKAIANLVYSKRYGNNAPGDGWKFRGRGLKQITFLDNYYRCGHALEIDLIINPDLLLQDDYA
ARSAGWFWYVNNCNEYADNGSFVRLTKVINGGTNGLADRQARLLVAERVLCP
>Mature_212_residues
MQISLSQFQLAASLSPALASRWYPHILSAMKEFGIDTPRRQAAFIAQIGHESRDFKALVESFNYSVVGLKTTFSSRLTAG
QCEMLGRQPGETVVPIERQKAIANLVYSKRYGNNAPGDGWKFRGRGLKQITFLDNYYRCGHALEIDLIINPDLLLQDDYA
ARSAGWFWYVNNCNEYADNGSFVRLTKVINGGTNGLADRQARLLVAERVLCP

Specific function: Unknown

COG id: COG3179

COG function: function code R; Predicted chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage D29 and phage L5 gp10 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000726 [H]

Pfam domain/function: PF00182 Glyco_hydro_19 [H]

EC number: NA

Molecular weight: Translated: 23742; Mature: 23742

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISLSQFQLAASLSPALASRWYPHILSAMKEFGIDTPRRQAAFIAQIGHESRDFKALVE
CCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
SFNYSVVGLKTTFSSRLTAGQCEMLGRQPGETVVPIERQKAIANLVYSKRYGNNAPGDGW
HCCCEEEEEEEHHCCCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCE
KFRGRGLKQITFLDNYYRCGHALEIDLIINPDLLLQDDYAARSAGWFWYVNNCNEYADNG
EECCCCCEEEEEHHHHHHCCCEEEEEEEECCCEEEECCCCCCCCCEEEEECCCCCCCCCC
SFVRLTKVINGGTNGLADRQARLLVAERVLCP
CEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQISLSQFQLAASLSPALASRWYPHILSAMKEFGIDTPRRQAAFIAQIGHESRDFKALVE
CCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
SFNYSVVGLKTTFSSRLTAGQCEMLGRQPGETVVPIERQKAIANLVYSKRYGNNAPGDGW
HCCCEEEEEEEHHCCCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCE
KFRGRGLKQITFLDNYYRCGHALEIDLIINPDLLLQDDYAARSAGWFWYVNNCNEYADNG
EECCCCCEEEEEHHHHHHCCCEEEEEEEECCCEEEECCCCCCCCCEEEEECCCCCCCCCC
SFVRLTKVINGGTNGLADRQARLLVAERVLCP
CEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]