| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022451
Identifier: 170022451
GI number: 170022451
Start: 240950
End: 243157
Strand: Reverse
Name: 170022451
Synonym: YPK_0190
Alternate gene names: NA
Gene position: 243157-240950 (Counterclockwise)
Preceding gene: 170022452
Following gene: 170022450
Centisome position: 5.19
GC content: 48.01
Gene sequence:
>2208_bases ATGGCCCGCAACTTACAACTGGCGTTGACCCTTTTTGCCAAAGATACTGCGTCAAAAGTCCTGCGCAAAACGATGCAGGA TACAATAAATCAGAGTAAATCTGTCGCAAAAGCTGACAATCAGCTTGGCAAATCCCAGAAACAAAGCGCCGATACCGCCA TTCGATCATCGAAGTCACTCCAGTCAGAATGGCAGCGCGCCAGTAATGCGCGCTCTACGCTTGGAATTCGCTCTGAACGT GATATTCAGCGTGAAATTCAGCTCACTCAGGCCGCCTATAATCGCCTGACCCGCACTGGTACACTCTCGGCAAATGAACA ATCTCGCGCCTTTGCGTCAATGTCAGAGCGCGTCAGTAAATTGCGTGGTGAACTCAGTGGCGCAAGCCAGTCACTGTCGC GGTTCGAACGAGCAAAAGGCATTGGCTCAAATGCGATGGCGATAGCGGGCGGTGTAGCAGCGATGGGAGCCGTTCTGGCA CAGCCGGTTCGTAACCAGATGAGTTATGATAGTCGCGTGGCAATGATGGCTAATACGGCATATGCAGAGCGAGGTGTTGA GGGCCGCATTGAGGGTAAAAAAGAACTCTCCGGCGCTATCAAGAATGCAGTAACTATTGGTGGTGGTACGAAGGAGTCAG CCGCTGATACATTGGATAAACTGCTTGCCTCGGGTGCAGTTGATATGGACTCAGCGAAAACCTTGTTACCTGTAATTCAG AAATATGCTACAGCAACCGGCGCTGATCCCACGGACCTGGCTAACATCGTGATTTCTTTAAAGCGTTCTTTTGGCATTCA GAATAAAGATGTTGAAAAAGCGTTAAACATGAGCATTGTCGGTGGACAAGAGGGTTCTTATGAACTTGCCGACATGGCAA AAGCATTGCCTGAACAACTCGCCCTCGCCAAAAGCTTGGGTATGAGTGGCCTGGACGATTATGCAACATTGCTGGGTGTC AATCAGGGAGCAGCAACAACTGCGGGTACCAGCAGTCAGGCAGGTACAAATGTTATTAATTTATTAGCAAAGATTAATAG CAAGGACGCTGCCAGAGCCGCCGCACGAGTGGAGTACAATGGCAAAGGGATCGACTTACCGGGCAGTCTTGCCGCAGCCA AAGAAAAGGGCATAAATCCAATTGATGCATTTATGGGGATTGTCGATAAAGTTGTCGCTAATGACCCGGCTTATCAAAAG CTGGAAGCAAAACTTAAAACTGCTAAAGGTGAAGATAGAAAGCAAGTCCTAGAGTCAATGTCAAAAATCCTGGAAGGTTC GGCTATTGGTTCAATCATTGCAGACCAGCAGGCGCTTCTTGGGTTGCTCGGGTATCGGGGAAATAAAGAATATGTTCAAG GTGTTATTAAGAAAAGTAATGAGCAGCGAGAATTAAGGCCTGGGGAAGGAGCAGGTGATATCAATTTCGCCGTCATATCT GATACGCCAGATTTCAAAACAGACCAGCTAAAAAACGTTCGCGACTTCGCTGAAATGGATTCAATTAAACCCCTCTCAGA TGTGCTGGGCCGACTTTCAAAAGAATTAACCGACTACGCTGAGCAGTATCCTGGATTGACTGTCGCTGTATCCGGCGCGA CTACCGGTATCAAAGCGCTCGCAGCAGGGGCCGCCGCTGTCGCAGGTATTCGTATCCTGACAGGCGGCGGCATTCCCGGC ATCAGTAAGAAAGGCGGCTCATTCAACCCGACAGATATCTTATCAGGGGACAACTCTAATTCCGGTGTCGTGCCAGTGTA TGTCACTAACTGGCAAGATATTGGTGAAAAAAATAAACTCGTTGACGCATTCAAAGATTTACCTGGTGCCGTTGGTAAAT TCGCCAGCTATGTAAATGTTGTAACAGCATTGAAAGAATCTTTTGATGAGCGGCGTAAACAGAATCAAAAAGAGGCTGAT GAAAAAGGCGTCAATGTCGGTGAATATTTGATTAGTAAAAGGGCTAATCAAAAGCCTCTGTTTGATTTTGACCCGGCGTC CTGGTGGAGTAAGCCTTCAACAATCGGCAATGGAGATAATCCAGATAGTTTCGGTGTACCAGCATATATGAAGTCCACTC AGCAGCAAGGCTACCCATCAATCCCTATTCAGATCCAGAATCGCATGGAGCTGGACGGAAAAGTCCTTGCAGAGTCAACA AATGAAGTGAATGCCGCGCAAGCTAATCGCGGTTCGACGGGAGGCTAG
Upstream 100 bases:
>100_bases CGCTAGCCCGACTGCACGGCAAGAAAACGTCGTCAGTCGGCAAAACTAAAACAACCCGCCGCGTGAAATCTCAACGCCAG AATAGTCCACGGAGAACGTA
Downstream 100 bases:
>100_bases TATGGCGTGGGCAGATAGTATGTTAGATGCTTCATTTCGCGGTATGATATTTGATGTGATCAATACACGCGATAGCTGGA GCCGTGACACAGCGCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Tape Measure Core Region; Pyocin R2_PP Tail Length Determination Protein; Prophage; Bacteriophage Tail Protein; Tail Tape Measure Protein; Tail Tape Meausure Protein; Phage Tail Length Determination Protein; Bacteriophage Tail Length Determination Protein; Tail Tape Measure Core Region
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSLQSEWQRASNARSTLGIRSER DIQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSKLRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLA QPVRNQMSYDSRVAMMANTAYAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQ KYATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQLALAKSLGMSGLDDYATLLGV NQGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYNGKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQK LEAKLKTAKGEDRKQVLESMSKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVIS DTPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKALAAGAAAVAGIRILTGGGIPG ISKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKLVDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEAD EKGVNVGEYLISKRANQKPLFDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAEST NEVNAAQANRGSTGG
Sequences:
>Translated_735_residues MARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSLQSEWQRASNARSTLGIRSER DIQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSKLRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLA QPVRNQMSYDSRVAMMANTAYAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQ KYATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQLALAKSLGMSGLDDYATLLGV NQGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYNGKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQK LEAKLKTAKGEDRKQVLESMSKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVIS DTPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKALAAGAAAVAGIRILTGGGIPG ISKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKLVDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEAD EKGVNVGEYLISKRANQKPLFDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAEST NEVNAAQANRGSTGG >Mature_734_residues ARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSLQSEWQRASNARSTLGIRSERD IQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSKLRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLAQ PVRNQMSYDSRVAMMANTAYAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQK YATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQLALAKSLGMSGLDDYATLLGVN QGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYNGKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQKL EAKLKTAKGEDRKQVLESMSKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVISD TPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKALAAGAAAVAGIRILTGGGIPGI SKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKLVDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEADE KGVNVGEYLISKRANQKPLFDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAESTN EVNAAQANRGSTGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77841; Mature: 77709
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSL CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QSEWQRASNARSTLGIRSERDIQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSK HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLAQPVRNQMSYDSRVAMMANTA HHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQ HHHCCCCCCCCCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KYATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQL HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHH ALAKSLGMSGLDDYATLLGVNQGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYN HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEEC GKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQKLEAKLKTAKGEDRKQVLESM CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH SKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVIS HHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC DTPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKAL CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH AAGAAAVAGIRILTGGGIPGISKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKL HHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCHHHHH VDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEADEKGVNVGEYLISKRANQKPL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC FDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAEST CCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHCCC NEVNAAQANRGSTGG CCCCHHHCCCCCCCC >Mature Secondary Structure ARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSL CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QSEWQRASNARSTLGIRSERDIQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSK HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLAQPVRNQMSYDSRVAMMANTA HHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQ HHHCCCCCCCCCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KYATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQL HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHH ALAKSLGMSGLDDYATLLGVNQGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYN HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEEC GKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQKLEAKLKTAKGEDRKQVLESM CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH SKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVIS HHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC DTPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKAL CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH AAGAAAVAGIRILTGGGIPGISKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKL HHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCHHHHH VDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEADEKGVNVGEYLISKRANQKPL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC FDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAEST CCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHCCC NEVNAAQANRGSTGG CCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA