Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170022451

Identifier: 170022451

GI number: 170022451

Start: 240950

End: 243157

Strand: Reverse

Name: 170022451

Synonym: YPK_0190

Alternate gene names: NA

Gene position: 243157-240950 (Counterclockwise)

Preceding gene: 170022452

Following gene: 170022450

Centisome position: 5.19

GC content: 48.01

Gene sequence:

>2208_bases
ATGGCCCGCAACTTACAACTGGCGTTGACCCTTTTTGCCAAAGATACTGCGTCAAAAGTCCTGCGCAAAACGATGCAGGA
TACAATAAATCAGAGTAAATCTGTCGCAAAAGCTGACAATCAGCTTGGCAAATCCCAGAAACAAAGCGCCGATACCGCCA
TTCGATCATCGAAGTCACTCCAGTCAGAATGGCAGCGCGCCAGTAATGCGCGCTCTACGCTTGGAATTCGCTCTGAACGT
GATATTCAGCGTGAAATTCAGCTCACTCAGGCCGCCTATAATCGCCTGACCCGCACTGGTACACTCTCGGCAAATGAACA
ATCTCGCGCCTTTGCGTCAATGTCAGAGCGCGTCAGTAAATTGCGTGGTGAACTCAGTGGCGCAAGCCAGTCACTGTCGC
GGTTCGAACGAGCAAAAGGCATTGGCTCAAATGCGATGGCGATAGCGGGCGGTGTAGCAGCGATGGGAGCCGTTCTGGCA
CAGCCGGTTCGTAACCAGATGAGTTATGATAGTCGCGTGGCAATGATGGCTAATACGGCATATGCAGAGCGAGGTGTTGA
GGGCCGCATTGAGGGTAAAAAAGAACTCTCCGGCGCTATCAAGAATGCAGTAACTATTGGTGGTGGTACGAAGGAGTCAG
CCGCTGATACATTGGATAAACTGCTTGCCTCGGGTGCAGTTGATATGGACTCAGCGAAAACCTTGTTACCTGTAATTCAG
AAATATGCTACAGCAACCGGCGCTGATCCCACGGACCTGGCTAACATCGTGATTTCTTTAAAGCGTTCTTTTGGCATTCA
GAATAAAGATGTTGAAAAAGCGTTAAACATGAGCATTGTCGGTGGACAAGAGGGTTCTTATGAACTTGCCGACATGGCAA
AAGCATTGCCTGAACAACTCGCCCTCGCCAAAAGCTTGGGTATGAGTGGCCTGGACGATTATGCAACATTGCTGGGTGTC
AATCAGGGAGCAGCAACAACTGCGGGTACCAGCAGTCAGGCAGGTACAAATGTTATTAATTTATTAGCAAAGATTAATAG
CAAGGACGCTGCCAGAGCCGCCGCACGAGTGGAGTACAATGGCAAAGGGATCGACTTACCGGGCAGTCTTGCCGCAGCCA
AAGAAAAGGGCATAAATCCAATTGATGCATTTATGGGGATTGTCGATAAAGTTGTCGCTAATGACCCGGCTTATCAAAAG
CTGGAAGCAAAACTTAAAACTGCTAAAGGTGAAGATAGAAAGCAAGTCCTAGAGTCAATGTCAAAAATCCTGGAAGGTTC
GGCTATTGGTTCAATCATTGCAGACCAGCAGGCGCTTCTTGGGTTGCTCGGGTATCGGGGAAATAAAGAATATGTTCAAG
GTGTTATTAAGAAAAGTAATGAGCAGCGAGAATTAAGGCCTGGGGAAGGAGCAGGTGATATCAATTTCGCCGTCATATCT
GATACGCCAGATTTCAAAACAGACCAGCTAAAAAACGTTCGCGACTTCGCTGAAATGGATTCAATTAAACCCCTCTCAGA
TGTGCTGGGCCGACTTTCAAAAGAATTAACCGACTACGCTGAGCAGTATCCTGGATTGACTGTCGCTGTATCCGGCGCGA
CTACCGGTATCAAAGCGCTCGCAGCAGGGGCCGCCGCTGTCGCAGGTATTCGTATCCTGACAGGCGGCGGCATTCCCGGC
ATCAGTAAGAAAGGCGGCTCATTCAACCCGACAGATATCTTATCAGGGGACAACTCTAATTCCGGTGTCGTGCCAGTGTA
TGTCACTAACTGGCAAGATATTGGTGAAAAAAATAAACTCGTTGACGCATTCAAAGATTTACCTGGTGCCGTTGGTAAAT
TCGCCAGCTATGTAAATGTTGTAACAGCATTGAAAGAATCTTTTGATGAGCGGCGTAAACAGAATCAAAAAGAGGCTGAT
GAAAAAGGCGTCAATGTCGGTGAATATTTGATTAGTAAAAGGGCTAATCAAAAGCCTCTGTTTGATTTTGACCCGGCGTC
CTGGTGGAGTAAGCCTTCAACAATCGGCAATGGAGATAATCCAGATAGTTTCGGTGTACCAGCATATATGAAGTCCACTC
AGCAGCAAGGCTACCCATCAATCCCTATTCAGATCCAGAATCGCATGGAGCTGGACGGAAAAGTCCTTGCAGAGTCAACA
AATGAAGTGAATGCCGCGCAAGCTAATCGCGGTTCGACGGGAGGCTAG

Upstream 100 bases:

>100_bases
CGCTAGCCCGACTGCACGGCAAGAAAACGTCGTCAGTCGGCAAAACTAAAACAACCCGCCGCGTGAAATCTCAACGCCAG
AATAGTCCACGGAGAACGTA

Downstream 100 bases:

>100_bases
TATGGCGTGGGCAGATAGTATGTTAGATGCTTCATTTCGCGGTATGATATTTGATGTGATCAATACACGCGATAGCTGGA
GCCGTGACACAGCGCAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Tail Tape Measure Core Region; Pyocin R2_PP Tail Length Determination Protein; Prophage; Bacteriophage Tail Protein; Tail Tape Measure Protein; Tail Tape Meausure Protein; Phage Tail Length Determination Protein; Bacteriophage Tail Length Determination Protein; Tail Tape Measure Core Region

Number of amino acids: Translated: 735; Mature: 734

Protein sequence:

>735_residues
MARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSLQSEWQRASNARSTLGIRSER
DIQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSKLRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLA
QPVRNQMSYDSRVAMMANTAYAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQ
KYATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQLALAKSLGMSGLDDYATLLGV
NQGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYNGKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQK
LEAKLKTAKGEDRKQVLESMSKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVIS
DTPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKALAAGAAAVAGIRILTGGGIPG
ISKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKLVDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEAD
EKGVNVGEYLISKRANQKPLFDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAEST
NEVNAAQANRGSTGG

Sequences:

>Translated_735_residues
MARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSLQSEWQRASNARSTLGIRSER
DIQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSKLRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLA
QPVRNQMSYDSRVAMMANTAYAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQ
KYATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQLALAKSLGMSGLDDYATLLGV
NQGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYNGKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQK
LEAKLKTAKGEDRKQVLESMSKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVIS
DTPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKALAAGAAAVAGIRILTGGGIPG
ISKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKLVDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEAD
EKGVNVGEYLISKRANQKPLFDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAEST
NEVNAAQANRGSTGG
>Mature_734_residues
ARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSLQSEWQRASNARSTLGIRSERD
IQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSKLRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLAQ
PVRNQMSYDSRVAMMANTAYAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQK
YATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQLALAKSLGMSGLDDYATLLGVN
QGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYNGKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQKL
EAKLKTAKGEDRKQVLESMSKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVISD
TPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKALAAGAAAVAGIRILTGGGIPGI
SKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKLVDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEADE
KGVNVGEYLISKRANQKPLFDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAESTN
EVNAAQANRGSTGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77841; Mature: 77709

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSL
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QSEWQRASNARSTLGIRSERDIQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSK
HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLAQPVRNQMSYDSRVAMMANTA
HHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQ
HHHCCCCCCCCCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KYATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQL
HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHH
ALAKSLGMSGLDDYATLLGVNQGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYN
HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEEC
GKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQKLEAKLKTAKGEDRKQVLESM
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH
SKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVIS
HHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
DTPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKAL
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
AAGAAAVAGIRILTGGGIPGISKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKL
HHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCHHHHH
VDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEADEKGVNVGEYLISKRANQKPL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
FDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAEST
CCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHCCC
NEVNAAQANRGSTGG
CCCCHHHCCCCCCCC
>Mature Secondary Structure 
ARNLQLALTLFAKDTASKVLRKTMQDTINQSKSVAKADNQLGKSQKQSADTAIRSSKSL
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QSEWQRASNARSTLGIRSERDIQREIQLTQAAYNRLTRTGTLSANEQSRAFASMSERVSK
HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LRGELSGASQSLSRFERAKGIGSNAMAIAGGVAAMGAVLAQPVRNQMSYDSRVAMMANTA
HHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YAERGVEGRIEGKKELSGAIKNAVTIGGGTKESAADTLDKLLASGAVDMDSAKTLLPVIQ
HHHCCCCCCCCCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KYATATGADPTDLANIVISLKRSFGIQNKDVEKALNMSIVGGQEGSYELADMAKALPEQL
HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHH
ALAKSLGMSGLDDYATLLGVNQGAATTAGTSSQAGTNVINLLAKINSKDAARAAARVEYN
HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEEC
GKGIDLPGSLAAAKEKGINPIDAFMGIVDKVVANDPAYQKLEAKLKTAKGEDRKQVLESM
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH
SKILEGSAIGSIIADQQALLGLLGYRGNKEYVQGVIKKSNEQRELRPGEGAGDINFAVIS
HHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
DTPDFKTDQLKNVRDFAEMDSIKPLSDVLGRLSKELTDYAEQYPGLTVAVSGATTGIKAL
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
AAGAAAVAGIRILTGGGIPGISKKGGSFNPTDILSGDNSNSGVVPVYVTNWQDIGEKNKL
HHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCHHHHH
VDAFKDLPGAVGKFASYVNVVTALKESFDERRKQNQKEADEKGVNVGEYLISKRANQKPL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
FDFDPASWWSKPSTIGNGDNPDSFGVPAYMKSTQQQGYPSIPIQIQNRMELDGKVLAEST
CCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHCCC
NEVNAAQANRGSTGG
CCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA