| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022447
Identifier: 170022447
GI number: 170022447
Start: 237377
End: 237721
Strand: Reverse
Name: 170022447
Synonym: YPK_0186
Alternate gene names: NA
Gene position: 237721-237377 (Counterclockwise)
Preceding gene: 170022448
Following gene: 170022446
Centisome position: 5.07
GC content: 54.2
Gene sequence:
>345_bases ATGCTAATTGACCCTTCAACCCGCGACTACACTGGCGAACGCATCAATACGCTGGCAAATGCCGTCTACCTGTGCCTGAT GGTTCCGCTAGGCTCATGGTGGGCCGATATCTCGCTGGGCTCACGTTTGCATGAACTGGCTCGCGAGAAAGATGTCCCTC GTGTTGATACCCTGGCTCGCCAATATGCTGAACAGGCATTACAGCGCCTGATTGATGATAATCGCGCCACGGCGATCACG GTGACAGCGACCCGATTAATGCCCGGCTGGCTGTTACTGCATATCGTGGTGGAAACCGCCTCCAATCAATCAGAAACGTT TCGCCATCAAGTGAGGGTTGCCTAA
Upstream 100 bases:
>100_bases TGATAGCATGAGCGGCTCCACTTCAGGCGCTAAAGCCTAACCCACTGAACCTCTTCACCTGAATTTTCTTGCTCCATGCC GCCATAGTGGCGGCATGGAC
Downstream 100 bases:
>100_bases TGCCCCATATTACACCCACCGTCGAGGCTATTCGTTCCAATATTTTACGCGATATACGTAATTTATTAGTCGATGCCGAT ATTTCTGAAAACAGTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MLIDPSTRDYTGERINTLANAVYLCLMVPLGSWWADISLGSRLHELAREKDVPRVDTLARQYAEQALQRLIDDNRATAIT VTATRLMPGWLLLHIVVETASNQSETFRHQVRVA
Sequences:
>Translated_114_residues MLIDPSTRDYTGERINTLANAVYLCLMVPLGSWWADISLGSRLHELAREKDVPRVDTLARQYAEQALQRLIDDNRATAIT VTATRLMPGWLLLHIVVETASNQSETFRHQVRVA >Mature_114_residues MLIDPSTRDYTGERINTLANAVYLCLMVPLGSWWADISLGSRLHELAREKDVPRVDTLARQYAEQALQRLIDDNRATAIT VTATRLMPGWLLLHIVVETASNQSETFRHQVRVA
Specific function: Unknown
COG id: COG4381
COG function: function code S; Mu-like prophage protein gp46
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12917; Mature: 12917
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDPSTRDYTGERINTLANAVYLCLMVPLGSWWADISLGSRLHELAREKDVPRVDTLAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH QYAEQALQRLIDDNRATAITVTATRLMPGWLLLHIVVETASNQSETFRHQVRVA HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MLIDPSTRDYTGERINTLANAVYLCLMVPLGSWWADISLGSRLHELAREKDVPRVDTLAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH QYAEQALQRLIDDNRATAITVTATRLMPGWLLLHIVVETASNQSETFRHQVRVA HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA