| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is idnK [H]
Identifier: 170022397
GI number: 170022397
Start: 163688
End: 164191
Strand: Direct
Name: idnK [H]
Synonym: YPK_0136
Alternate gene names: 170022397
Gene position: 163688-164191 (Clockwise)
Preceding gene: 170022395
Following gene: 170022398
Centisome position: 3.49
GC content: 50.99
Gene sequence:
>504_bases ATGGCGGGACAGAGCATTATCGTGATGGGCGTATCGGGTAGTGGTAAAACCACAGTCGGGGAGGCTGTCGCGCGCCAGAT TCATGCTAAATTTATTGATGGTGATGATTTACACCCCCGCGCCAATATTCAGAAAATGGGGAGTGGGCAACCGCTTAATG ACGCGGACCGTATGCCATGGTTAGAGCGCCTAAGCGATGCGGCTTACAGCCTGAGCCATAAAAATGAAACGGGCATTATT GTTTGTTCTGCGCTGAAACGTTGTTACCGCGATCGCTTGCGCGAGGGCAATCAGGGCATGGTATTTTTATATCTGAAGGG CAATTTTGACGTCATCATGGCGCGGCTGCAAGCACGTTCCGGCCATTTTATGCCAAGCGATTTATTGAGAAGCCAATTTG ACGCCTTGGAAGAACCCGGCCCGGATGAGCCTGATGTGATTTGTGTGGATATTGATACTGATATTGATGAGGTTGTCCGG CGATGCGTGGGGGCGTTGGCTTAG
Upstream 100 bases:
>100_bases CACATCTCCATTTGTTACCGGTATCATGATACCGGTAACATGGTAAAATACGGAACTATAGGCACCAGTAGAATTTCCAT TCTGAGATAGAGATCAACAT
Downstream 100 bases:
>100_bases TGAGTTGATTTGGTGATCTGGAGCTGGTTCGCGTCATCGGATTTTGCCAGCAGTCTGATAAAGTAATTTTATATCTATAC GGGGTAAACTCAGGGGCTTT
Product: carbohydrate kinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MAGQSIIVMGVSGSGKTTVGEAVARQIHAKFIDGDDLHPRANIQKMGSGQPLNDADRMPWLERLSDAAYSLSHKNETGII VCSALKRCYRDRLREGNQGMVFLYLKGNFDVIMARLQARSGHFMPSDLLRSQFDALEEPGPDEPDVICVDIDTDIDEVVR RCVGALA
Sequences:
>Translated_167_residues MAGQSIIVMGVSGSGKTTVGEAVARQIHAKFIDGDDLHPRANIQKMGSGQPLNDADRMPWLERLSDAAYSLSHKNETGII VCSALKRCYRDRLREGNQGMVFLYLKGNFDVIMARLQARSGHFMPSDLLRSQFDALEEPGPDEPDVICVDIDTDIDEVVR RCVGALA >Mature_166_residues AGQSIIVMGVSGSGKTTVGEAVARQIHAKFIDGDDLHPRANIQKMGSGQPLNDADRMPWLERLSDAAYSLSHKNETGIIV CSALKRCYRDRLREGNQGMVFLYLKGNFDVIMARLQARSGHFMPSDLLRSQFDALEEPGPDEPDVICVDIDTDIDEVVRR CVGALA
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=173, Percent_Identity=41.6184971098266, Blast_Score=141, Evalue=2e-34, Organism=Escherichia coli, GI1790719, Length=166, Percent_Identity=59.6385542168675, Blast_Score=211, Evalue=3e-56, Organism=Escherichia coli, GI87082265, Length=157, Percent_Identity=57.3248407643312, Blast_Score=201, Evalue=2e-53, Organism=Caenorhabditis elegans, GI25146487, Length=170, Percent_Identity=42.9411764705882, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6320454, Length=157, Percent_Identity=38.2165605095541, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18362; Mature: 18231
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQSIIVMGVSGSGKTTVGEAVARQIHAKFIDGDDLHPRANIQKMGSGQPLNDADRMPW CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHH LERLSDAAYSLSHKNETGIIVCSALKRCYRDRLREGNQGMVFLYLKGNFDVIMARLQARS HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC GHFMPSDLLRSQFDALEEPGPDEPDVICVDIDTDIDEVVRRCVGALA CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure AGQSIIVMGVSGSGKTTVGEAVARQIHAKFIDGDDLHPRANIQKMGSGQPLNDADRMPW CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHH LERLSDAAYSLSHKNETGIIVCSALKRCYRDRLREGNQGMVFLYLKGNFDVIMARLQARS HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC GHFMPSDLLRSQFDALEEPGPDEPDVICVDIDTDIDEVVRRCVGALA CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]