| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022358
Identifier: 170022358
GI number: 170022358
Start: 114989
End: 115468
Strand: Direct
Name: 170022358
Synonym: YPK_0097
Alternate gene names: NA
Gene position: 114989-115468 (Clockwise)
Preceding gene: 170022357
Following gene: 170022359
Centisome position: 2.45
GC content: 47.08
Gene sequence:
>480_bases ATGAAAAAACAAATTTTAGCGACGTTGCTACTGGGCGCTCTGTTTTGTGTACCGGTTTATGCCGCACAGATTGTTGCCGT CACGGCATCGGGGCATGACAGCGAAAAAGGCCACGTACCAGCGAATATTGCTGATGGTGATGTCAAAACACGTTGGGCGG CTTCGGGTGATAGTTGGATTCAACTGGAGCTTGATAAAGCCCAATCGATTGAAAATATTCTGATCGTGCCGTTTAAGGCC ACCGAGCGTAAGCTGAAATTTGCCATCGCTTACTCTACTGATGGCAAAACCTGGCAATCATTGGCCGAAGGGTTGGAAAC GATAACTACGGACAAAAAGGGTGAGAAGTTGACCTTTTCGCCTATCAACGCCAAATATATCAAATTGGAAACCTTTGGCA CGGATGTCAACAAATGGAGTGCGATTAACGAAGTCGCCATCAACAGTCTCGCCACGGTGCCTAGTCGCGCCATTAATTAA
Upstream 100 bases:
>100_bases CCGCTGCTGGTAAAAGTGCCGGGCTGCTGCTCCCCAGAGTCGGTTAGCCTCTGGCACTTTTCCCCACGGGTTATTGCAGC GCAATAAAAAGGACACTGAG
Downstream 100 bases:
>100_bases CCGCTGATGATCGCTGCCGTAAACCGCTCCTGTGCTAGTTATTGCACAGGAGCCTGTAAGTTCTATCCCCGTTTTATTTG AAGTCACTGCTATTTGAAGA
Product: coagulation factor 5/8 type domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWIQLELDKAQSIENILIVPFKA TERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFSPINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRAIN
Sequences:
>Translated_159_residues MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWIQLELDKAQSIENILIVPFKA TERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFSPINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRAIN >Mature_159_residues MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWIQLELDKAQSIENILIVPFKA TERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFSPINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRAIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17263; Mature: 17263
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS50022 FA58C_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWI CCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEE QLELDKAQSIENILIVPFKATERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFS EEEECCCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEC PINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRAIN CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWI CCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEE QLELDKAQSIENILIVPFKATERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFS EEEECCCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEC PINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRAIN CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA