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The map label for this gene is 170022280

Identifier: 170022280

GI number: 170022280

Start: 21718

End: 22362

Strand: Direct

Name: 170022280

Synonym: YPK_0018

Alternate gene names: NA

Gene position: 21718-22362 (Clockwise)

Preceding gene: 170022275

Following gene: 170022284

Centisome position: 0.46

GC content: 53.64

Gene sequence:

>645_bases
ATGAATATTGATCATGGGGCCCGCCAGCCACAATCAGTCGGTGAACGGCTACTGCTGCTGCTCAAAACTCACGGCCCGCT
ACAAGCAGGTGAGGCGGGGAACATTTTGGGCACCACCGGTGAAGCGGCGCGTCAGCAGTTTGTTAAACTGGCCAAAAAAG
GGCTAGTGGTGGCCGAAGCACAAACCCGCGGTGTGGGGCGGCCAATTCAGTTATGGCAATTAACCGAGAGCGGTAATACA
CATTTTCCTGATGCCCATGGGGAGTTAGCTGTGCAACTTTTGCGCTTAATTCGTACACAATTGGGCGATAACGCACTGGA
ATTACTGATCGATAGCCGTGAACAGGAAACTCGCGATCAATATTGTCAGGCGATGGTCGGGGTCAGTAATGTGGCTGAAC
GCGTCGAGCGGTTGGTGGCTATCCGCACCGGTGAAGGATATATGGCACAATCGCAGGTCGAGGCCGATGGCACTATTTTG
TTGATCGAGAATCATTGCCCTATCTGGGCGGCGGCGGCCAGTTGCCAGCGTTTTTGCCGTACCGAACTGGCGGTATTCCA
GCAAGCATTGGGCGTGCCGGTTGAGCGGGTTGAACATATTTTATCTGGTGCTCATCGGTGTACTTACCGCATTCACCCCG
AATAA

Upstream 100 bases:

>100_bases
TACATGTTAGATAAATAATGCATGTTAGATAAACAATACATATTAGATAAACAGTGCATGAGCCAAAAATAAAAAATGTT
TCAGTAATACCGGGGAAGAG

Downstream 100 bases:

>100_bases
TTATGATGACCGGGAGCTTGTCGCCAGGGGAAAATGGGGAGCAGTGCGGATAAGCCAAAGGACATTATCCGCATGTTTTA
TCACGGTGTTTACTATTGAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator; Regulatory Protein ArsR; DeoR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; HTH Domain Family; Transcriptional Regulator ArsR Family; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcription Regulator Protein; ArsR Transcriptional Regulator; MarR Family Transcriptional Regulator; SufR Family Transcriptional Regulator; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNIDHGARQPQSVGERLLLLLKTHGPLQAGEAGNILGTTGEAARQQFVKLAKKGLVVAEAQTRGVGRPIQLWQLTESGNT
HFPDAHGELAVQLLRLIRTQLGDNALELLIDSREQETRDQYCQAMVGVSNVAERVERLVAIRTGEGYMAQSQVEADGTIL
LIENHCPIWAAAASCQRFCRTELAVFQQALGVPVERVEHILSGAHRCTYRIHPE

Sequences:

>Translated_214_residues
MNIDHGARQPQSVGERLLLLLKTHGPLQAGEAGNILGTTGEAARQQFVKLAKKGLVVAEAQTRGVGRPIQLWQLTESGNT
HFPDAHGELAVQLLRLIRTQLGDNALELLIDSREQETRDQYCQAMVGVSNVAERVERLVAIRTGEGYMAQSQVEADGTIL
LIENHCPIWAAAASCQRFCRTELAVFQQALGVPVERVEHILSGAHRCTYRIHPE
>Mature_214_residues
MNIDHGARQPQSVGERLLLLLKTHGPLQAGEAGNILGTTGEAARQQFVKLAKKGLVVAEAQTRGVGRPIQLWQLTESGNT
HFPDAHGELAVQLLRLIRTQLGDNALELLIDSREQETRDQYCQAMVGVSNVAERVERLVAIRTGEGYMAQSQVEADGTIL
LIENHCPIWAAAASCQRFCRTELAVFQQALGVPVERVEHILSGAHRCTYRIHPE

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23530; Mature: 23530

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDHGARQPQSVGERLLLLLKTHGPLQAGEAGNILGTTGEAARQQFVKLAKKGLVVAEA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEH
QTRGVGRPIQLWQLTESGNTHFPDAHGELAVQLLRLIRTQLGDNALELLIDSREQETRDQ
HHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH
YCQAMVGVSNVAERVERLVAIRTGEGYMAQSQVEADGTILLIENHCPIWAAAASCQRFCR
HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEECCCCEEEEEECCCCHHHHHHHHHHHHH
TELAVFQQALGVPVERVEHILSGAHRCTYRIHPE
HHHHHHHHHHCCCHHHHHHHHCCHHHEEEEECCC
>Mature Secondary Structure
MNIDHGARQPQSVGERLLLLLKTHGPLQAGEAGNILGTTGEAARQQFVKLAKKGLVVAEA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEH
QTRGVGRPIQLWQLTESGNTHFPDAHGELAVQLLRLIRTQLGDNALELLIDSREQETRDQ
HHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH
YCQAMVGVSNVAERVERLVAIRTGEGYMAQSQVEADGTILLIENHCPIWAAAASCQRFCR
HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEECCCCEEEEEECCCCHHHHHHHHHHHHH
TELAVFQQALGVPVERVEHILSGAHRCTYRIHPE
HHHHHHHHHHCCCHHHHHHHHCCHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA