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The map label for this gene is rne

Identifier: 170020520

GI number:

Start: 2765540

End: 2768725

Strand: Direct

Name: rne

Synonym: EcolC_2516

Alternate gene names: NA

Gene position: NA

Preceding gene: 170020518

Following gene: 170020532

Centisome position: NA

GC content: NA

Gene sequence:

>3186_bases
ATGAAAAGAATGTTAATCAACGCAACTCAGCAGGAAGAGTTGCGCGTTGCCCTTGTAGATGGGCAGCGTCTGTATGACCT
GGATATCGAAAGTCCAGGGCACGAGCAGAAAAAGGCAAACATCTACAAAGGTAAAATCACCCGCATTGAACCGAGTCTGG
AAGCTGCTTTTGTTGATTACGGCGCTGAACGTCACGGTTTCCTCCCACTAAAAGAAATTGCCCGCGAATATTTCCCTGCT
AACTACAGTGCTCATGGTCGTCCCAACATTAAAGATGTGTTGCGTGAAGGTCAGGAAGTCATTGTTCAGATCGATAAAGA
AGAGCGCGGCAACAAAGGCGCGGCATTAACCACCTTTATCAGTCTGGCGGGTAGCTATCTGGTTCTGATGCCGAACAACC
CGCGCGCGGGTGGCATTTCTCGCCGTATCGAAGGCGACGACCGTACCGAATTAAAAGAAGCACTGGCAAGCCTTGAACTG
CCGGAAGGCATGGGGCTTATCGTGCGCACCGCTGGCGTCGGCAAATCTGCTGAGGCACTGCAATGGGATTTAAGCTTCCG
TCTGAAACACTGGGAAGCCATCAAAAAAGCCGCTGAAAGCCGCCCGGCCCCGTTCCTGATTCATCAGGAGAGCAACGTAA
TCGTTCGCGCTTTCCGCGATTACTTACGCCAGGACATCGGCGAAATCCTTATCGATAACCCGAAAGTGCTCGAACTGGCA
CGTCAGCATATCGCTGCATTAGGTCGCCCGGATTTCAGCAGCAAAATCAAACTGTACACCGGCGAGATCCCGCTGTTCAG
CCACTACCAGATCGAGTCGCAGATCGAGTCCGCCTTCCAGCGTGAAGTCCGTCTGCCATCCGGTGGTTCGATTGTTATCG
ACAGTACCGAAGCGTTAACTGCCATCGACATCAACTCCGCACGCGCGACCCGCGGCGGCGATATCGAAGAAACCGCGTTT
AACACCAACCTCGAAGCTGCCGATGAGATTGCTCGTCAGCTGCGCCTGCGTGACCTCGGCGGCCTGATTGTTATCGACTT
CATCGACATGACGCCTGTACGCCACCAGCGTGCGGTAGAAAACCGTCTGCGTGAAGCGGTGCGTCAGGACCGTGCGCGTA
TTCAAATCAGCCATATTTCTCGCTTTGGCCTGCTGGAAATGTCCCGTCAGCGCCTGAGCCCATCACTGGGTGAATCCAGT
CATCACGTTTGTCCGCGTTGTTCTGGTACTGGCACCGTGCGTGACAACGAATCGCTGTCGCTCTCTATTCTGCGTCTGAT
CGAAGAAGAAGCGCTGAAAGAGAACACCCAGGAAGTTCACGCCATTGTTCCTGTGCCAATCGCTTCTTACCTGCTGAATG
AAAAACGTTCTGCGGTGAATGCGATTGAAACGCGTCAGGACGGTGTTCGCTGCGTGATTGTGCCAAACGATCAGATGGAA
ACCCCGCACTACCACGTGTTGCGCGTGCGCAAAGGGGAAGAAACGCCGACCTTAAGCTACATGCTGCCGAAACTGCATGA
AGAAGCGATGGCGCTGCCGTCTGAAGAAGAGTTCGCTGAACGTAAGCGTCCTGAACAACCTGCACTGGCAACCTTTGCCA
TGCCGGATGTGCCGCCAGCGCCAACCCCAGCTGAACCTGCCGCGACTGTCGTAGCCCCAGCACCGAAAGCTGCAACGGCA
ACACCAGCAGCTCCTGCACAACCTGGGCTATTAAGCCGCTTCTTCGGCGCACTGAAAGCGCTGTTCAGCGGTGGTGAAGA
AGCCAAACCGACCGAGCAACCAACACCGAAAGCAGAAGCGAAACCGGAACGTCAACAGGATCATCGCAAGCCTCGTCAGA
ACAACCGCCGTGACCGTAATGAGCGCCGCGACACCCGTAGCGAACGTACTGAAGGCAGCGATAATCGCGAAGAAAACCGT
CGTAATCGTCGCCAGGCACAGCAGCAGACTGCCGAGACGCGTGAGAGCCGTCAGCAAGCTGAGGTAACGGAAAAAGCACG
TACCACCGACGAGCAGCAAGCGCCGCGTCGTGAACGTAGCCGCCGCCGTAACGATGATAAACGTCAGGCGCAACAAGAAG
CGAAGGCGCTGAATGTTGAAGAGCAATCTGTTCAGGAAACCGAACAGGAAGAACGTGTACGTCCGGTTCAGCCGCGTCGT
AAACAGCGTCAGCTCAATCAGAAAGTGCGTTACGAGCAAAGCGTAGCCGAAGAAGCGGTAGTCGCACCGGTGGTTGAAGA
AACTGCCGCTGCCGAACCAATTGTTCAGGAAGCTCCAGCTCCACGCACAGAACTGGTGAAAGTCCCGCTGCCAGTCGTAG
CGCAAACTGCACCAGAACAGCAAGAAGAGAACAATGCTGATAACCGTGACAACGGTGGCATGCCGCGTCGTTCTCGCCGC
TCGCCTCGTCACCTGCGCGTGAGTGGTCAGCGTCGTCGTCGCTATCGTGACGAGCGTTATCCAACCCAATCGCCAATGCC
GTTGACCGTAGCGTGCGCGTCTCCGGAACTGGCCTCTGGCAAAGTCTGGATCCGCTATCCAATTGTACGTCCGCAAAATG
TACAGGTTGAAGAGCAGCGCGAACAGGAAGAAGTACAAGTGCAGCCGATGGTGACTGAGGTCCCTGTCGCCGCCGCTGTC
GAACCTGTTGTTAGCGCGCCAGTTGTTGAAGAAGTGGCTGAAGTCGTAGAAGCCCCCGTACCGGTTGCCGAACCGCAACC
GGAAGTGGTTGAAACGACGCATCCTGAAGTGATTGCCGCCGCGGTAACTGAACAGCCGCAGGTGATTACCGAGTCTGATG
TTGCCGTAGCCCAGGAAGTCGCAGAACACGCAGAACCGGTGGTTGAACCGCAGGAAGAGACGGCAGATATTGAAGAAGTT
GCCGAAACTGCTGAGGTTGTGGTTGCTGAACCTAAAGTTGTTGCTCAACCTGCCGCGCCAGTCGTCGCTGAAGTCGCAGC
AGAAGTTGAAACGGTAGCCGCGGTTGAACCAGAGATCACCGTTGAGCATAACCACGCTACCGCGCCAATGACGCGCGCTC
CGGCACCGGAATATGTTCCGGAGGCACCGCGTCACAGTGACTGGCAGCGCCCTACTTTTGCCTTCGAAGGTAAAGGTGCC
GCAGGTGGTCATACGGCAACGCATCATGCCTCTGCCGCTCCTGCGCGTCCGCAACCTGTTGAGTAA

Upstream 100 bases:

>100_bases
TTGGCGACGCGACTAGACACGAGGCCATCGGTTCACACCCGGAAAGGCGTTACTTTGCCCGCAGCTTAGTCGTCAATGTA
AGAATAATGAGTAAGTTACG

Downstream 100 bases:

>100_bases
TAATTAGCTCAAAGTAATCAAGCCCTGGTAACTGCCAGGGCTTTTTTATTTCATGTTTGAATCAACATATTAAAATTCAT
CAAATGGCATCCTTGCTAAC

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1061_residues
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPA
NYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAF
NTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESS
HHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQME
TPHYHVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAATVVAPAPKAATA
TPAAPAQPGLLSRFFGALKALFSGGEEAKPTEQPTPKAEAKPERQQDHRKPRQNNRRDRNERRDTRSERTEGSDNREENR
RNRRQAQQQTAETRESRQQAEVTEKARTTDEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRR
KQRQLNQKVRYEQSVAEEAVVAPVVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRSRR
SPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQNVQVEEQREQEEVQVQPMVTEVPVAAAV
EPVVSAPVVEEVAEVVEAPVPVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEV
AETAEVVVAEPKVVAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKGA
AGGHTATHHASAAPARPQPVE

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA