| Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
|---|---|
| Accession | NC_010470 |
| Length | 38,713 |
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The map label for this gene is 170016318
Identifier: 170016318
GI number: 170016318
Start: 10969
End: 11088
Strand: Direct
Name: 170016318
Synonym: LCK_p100011
Alternate gene names: NA
Gene position: 10969-11088 (Clockwise)
Preceding gene: 170016313
Following gene: 170016319
Centisome position: 28.33
GC content: 34.17
Gene sequence:
>120_bases ATGTCAATTCGTTATTCACAAGATTTCAAAGATTCATTAGTTAAACTACACCAAGAAGGCCGCTCACTTAAATCATTAGC AGAGGAATTTGGACCGTCAAAAGATTCTATTGCTATTTAG
Upstream 100 bases:
>100_bases TATTCATTCCCATTACCAATACGCTTCATCTCATGCTCTTATACTAAAAAAATGGACTATTTTTATTCAGTCCGTAAAGT AAAAGTATAGGCGTATTTTT
Downstream 100 bases:
>100_bases GTTAAACAAGCTACCCCAATCATGAACAAGGGTCAGTCAAAGACGTTAAAAGACGTCAAGCAATTAGAGAAACGTCTCGC TATTTTGGAGGAAGAAAACG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MSIRYSQDFKDSLVKLHQEGRSLKSLAEEFGPSKDSIAI
Sequences:
>Translated_39_residues MSIRYSQDFKDSLVKLHQEGRSLKSLAEEFGPSKDSIAI >Mature_38_residues SIRYSQDFKDSLVKLHQEGRSLKSLAEEFGPSKDSIAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4412; Mature: 4281
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRYSQDFKDSLVKLHQEGRSLKSLAEEFGPSKDSIAI CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SIRYSQDFKDSLVKLHQEGRSLKSLAEEFGPSKDSIAI CCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA