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The map label for this gene is hsdS [H]

Identifier: 169834416

GI number: 169834416

Start: 914421

End: 915338

Strand: Direct

Name: hsdS [H]

Synonym: SPH_0993

Alternate gene names: 169834416

Gene position: 914421-915338 (Clockwise)

Preceding gene: 169832734

Following gene: 169832994

Centisome position: 40.72

GC content: 30.07

Gene sequence:

>918_bases
ATGAAAAAAGTGAAGTTGGGGGAAGTTTGTGAGATTTTATCTGGTTACGCTTTTAAATCATCACAATTTAATGATAACAA
AATTGGTCTCCCCTTAATACGAATTCGAGATGTAGAAAGAGGTTTTTCTGATACCTACTTTGAAGGAACTTATCCCGAAG
AATATCTTATTAAAAATGGAGACTTATTGATTACAATGGATGGCAGTTTTATATTGAAAAAATGGGAGGGGGATTTAGCG
CTACTTAATCAACGTGTCTGTAAAATTAAAATTACGGATAAAAGTGTAGATGAAGGTTATATATCTTGGTTGATTCCTAA
ATTTTTAAAAGAAATTGAAGATAAGACCCCTTTTGTTACAGTGAAACATCTTTCAGTAGCTAAAATAAAAGATATCTCAT
TTGTATTGCCTAATAAACTAGAACAAAAGCTAATTGCAAAAAAACTAAATACGATAAGTCAAATTTATGATTTTCGTAAA
ATTCAATCAGAAAAATTTAACGAGCTCGTCAAATCCCGATTTAACGAGATGTTTGGGGAAAATAAAATATTTGAAAGCAT
TGATAACTTATTTGATATTATAGATGGTGATAGGGGCAAAAATTATCCTAAATCAGATGAGTTGTTTAGTGAGGAGTACT
GTTTATTTTTAAATACAAAGAATGTTACTAAAAACGGATTTTCATTCGATACAAAGCAATTTATCACTAAAACAAAGGAT
AAATTACTTCGAAAAGGCAAACTTGAGCGTTATGATATAGTCTTGACAATAAGAGGTACTGTTGGAAATGTAGCGTACTA
CGATGAATTAATAAAATATAAACATTTACGTATAAATTCAGGTATGGTAATATTACGTCCCAAGACACCAAATCACAATT
GGCAATCCAAAAATCTCTGGAAGAACTTGAAACTTTGA

Upstream 100 bases:

>100_bases
ACCAACAGAAGTCATATTAAAGAAAATCAATGATTTAGAAAAAGAAATTCAAGCTGGCTTGGCTGAATTGGAAAAATTAC
TCAAGTAGGGAGGTGGCTGT

Downstream 100 bases:

>100_bases
AGAAATCTCTGATGCAGGAGTATTTTGGCTGATATTCTGCCATTGTAATTACGGTAATGATTTGTTATAATACTTCAAAG
GAGGAAATCAGATGGTAGTA

Product: type I restriction enzyme EcoBI specificity protein (S protein)(S.EcoBI)

Products: NA

Alternate protein names: S.EcoBI; Type I restriction enzyme EcoBI specificity protein; S protein [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKKVKLGEVCEILSGYAFKSSQFNDNKIGLPLIRIRDVERGFSDTYFEGTYPEEYLIKNGDLLITMDGSFILKKWEGDLA
LLNQRVCKIKITDKSVDEGYISWLIPKFLKEIEDKTPFVTVKHLSVAKIKDISFVLPNKLEQKLIAKKLNTISQIYDFRK
IQSEKFNELVKSRFNEMFGENKIFESIDNLFDIIDGDRGKNYPKSDELFSEEYCLFLNTKNVTKNGFSFDTKQFITKTKD
KLLRKGKLERYDIVLTIRGTVGNVAYYDELIKYKHLRINSGMVILRPKTPNHNWQSKNLWKNLKL

Sequences:

>Translated_305_residues
MKKVKLGEVCEILSGYAFKSSQFNDNKIGLPLIRIRDVERGFSDTYFEGTYPEEYLIKNGDLLITMDGSFILKKWEGDLA
LLNQRVCKIKITDKSVDEGYISWLIPKFLKEIEDKTPFVTVKHLSVAKIKDISFVLPNKLEQKLIAKKLNTISQIYDFRK
IQSEKFNELVKSRFNEMFGENKIFESIDNLFDIIDGDRGKNYPKSDELFSEEYCLFLNTKNVTKNGFSFDTKQFITKTKD
KLLRKGKLERYDIVLTIRGTVGNVAYYDELIKYKHLRINSGMVILRPKTPNHNWQSKNLWKNLKL
>Mature_305_residues
MKKVKLGEVCEILSGYAFKSSQFNDNKIGLPLIRIRDVERGFSDTYFEGTYPEEYLIKNGDLLITMDGSFILKKWEGDLA
LLNQRVCKIKITDKSVDEGYISWLIPKFLKEIEDKTPFVTVKHLSVAKIKDISFVLPNKLEQKLIAKKLNTISQIYDFRK
IQSEKFNELVKSRFNEMFGENKIFESIDNLFDIIDGDRGKNYPKSDELFSEEYCLFLNTKNVTKNGFSFDTKQFITKTKD
KLLRKGKLERYDIVLTIRGTVGNVAYYDELIKYKHLRINSGMVILRPKTPNHNWQSKNLWKNLKL

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 35661; Mature: 35661

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVKLGEVCEILSGYAFKSSQFNDNKIGLPLIRIRDVERGFSDTYFEGTYPEEYLIKNG
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHEEECC
DLLITMDGSFILKKWEGDLALLNQRVCKIKITDKSVDEGYISWLIPKFLKEIEDKTPFVT
CEEEEECCCEEEEECCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE
VKHLSVAKIKDISFVLPNKLEQKLIAKKLNTISQIYDFRKIQSEKFNELVKSRFNEMFGE
EECCCEEHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKIFESIDNLFDIIDGDRGKNYPKSDELFSEEYCLFLNTKNVTKNGFSFDTKQFITKTKD
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
KLLRKGKLERYDIVLTIRGTVGNVAYYDELIKYKHLRINSGMVILRPKTPNHNWQSKNLW
HHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHH
KNLKL
HCCCC
>Mature Secondary Structure
MKKVKLGEVCEILSGYAFKSSQFNDNKIGLPLIRIRDVERGFSDTYFEGTYPEEYLIKNG
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHEEECC
DLLITMDGSFILKKWEGDLALLNQRVCKIKITDKSVDEGYISWLIPKFLKEIEDKTPFVT
CEEEEECCCEEEEECCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE
VKHLSVAKIKDISFVLPNKLEQKLIAKKLNTISQIYDFRKIQSEKFNELVKSRFNEMFGE
EECCCEEHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKIFESIDNLFDIIDGDRGKNYPKSDELFSEEYCLFLNTKNVTKNGFSFDTKQFITKTKD
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
KLLRKGKLERYDIVLTIRGTVGNVAYYDELIKYKHLRINSGMVILRPKTPNHNWQSKNLW
HHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHH
KNLKL
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6304321 [H]